Found: ...COUNTING... knotted stuctures in AlphaKnot 2.0. Displaying 1 - 100. No filters applied
Search results C-end knot depth between 10 and 11
Knot type Category Uniprot Organism pLDDT knotcore Protein name
Unknown AF4 A0A1K1SWI5-F1 Chitinophaga sancti 85.9 Phage Tail Collar Domain
Unknown AF4 A0A4R5D7L7-F1 Jiangella asiatica 84.3 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A7K0VKT2-F1 Actinomycetia bacterium 84.2 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A1V2B3F0-F1 [Flexibacter] sp 84.0 Collar domain-containing protein
Unknown AF4 A0A3A9WKF4-F1 Streptomyces radicis 83.4 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A1B1M6J9-F1 Streptomyces lincolnensis 83.3 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A853AMT2-F1 Saccharopolyspora hordei 83.2 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A1Z2L9H9-F1 Streptomyces albireticuli 82.0 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A813ZAB0-F1 Rotifer 79.4 NAD(P)(+)--arginine ADP-ribosyltransferase (EC 2.4.2.31) (Mono(ADP-ribosyl)transferase)
Unknown AF4 A0A318YIH2-F1 strain CBS 115656 74.8 Spherulation-specific family 4-domain-containing protein
Unknown AF1-Artifact Q9VS29-F1 Drome 72.2 Down syndrome cell adhesion molecule-like protein Dscam2
Unknown AF4 A0A6J6KJZ6-F1 freshwater metagenome 69.8 Unannotated protein
Unknown AF1-Unassigned Q6P3W6-F1 Human 49.3 Neuroblastoma breakpoint family member 10
Unknown AF1-Artifact E9QA35-F1 Mouse 41.2 Spermatogenesis-associated 31 subfamily D, member 1A
Unknown AF1-Artifact K7UZW2-F1 Maize 36.5 RING-type domain-containing protein
Unknown AF1-Unassigned Q9UKN1-F15 Human 33.8 Mucin-12
Unknown AF1-Artifact A0A1D6KED8-F1 Maize 33.5 Formin-like protein 20
96 AF4 A0A497NMH3-F1 Candidatus Bathyarchaeota 78.3 GH16 domain-containing protein
943 AF4 A0A3L6QGK9-F1 Proso millet 73.9 Pectinesterase-like
917 AF4 A0A7Y5QJC6-F1 Gemmatimonadaceae bacterium 64.8 Ig-like domain-containing protein
910 AF4 A0A0W8FSS8-F1 hydrocarbon metagenome 79.7 NHL repeat containing protein
83 AF4 R6R2E0-F1 Butyrivibrio sp 93.0 CHAT domain-containing protein
83 AF4 R5ED84-F1 Clostridium sp 92.0 Tetratricopeptide repeat protein
83 AF4 R6L2V5-F1 Eubacterium sp 91.9 HEAT repeat domain-containing protein
83 AF4 A0A174YQR9-F1 Lachnospira eligens 91.9 Histidine kinase
83 AF4 R6AE85-F1 Eubacterium eligens 91.9 Histidine kinase
83 AF4 A0A3D1NMZ8-F1 Eubacterium sp 91.8 Histidine kinase
83 AF4 A0A3C0J540-F1 Butyrivibrio sp 91.8 Tetratricopeptide repeat protein
83 AF4 A0A415MB77-F1 Lachnospira eligens 91.8 Histidine kinase
83 AF4 A0A1T4LW44-F1 Eubacterium ruminantium 91.8 Tetratricopeptide repeat protein
83 AF4 C4Z039-F1 Eubacterium eligens 91.8 Histidine kinase
83 AF4 A0A351PW51-F1 Eubacterium sp 91.6 Tetratricopeptide repeat protein
83 AF4 A0A351RHQ0-F1 Eubacterium sp 91.6 Histidine kinase
83 AF4 A0A3D0GZN8-F1 Eubacterium sp 91.5 Tetratricopeptide repeat protein
83 AF4 A0A413P7H0-F1 Eubacterium sp 91.4 Histidine kinase
83 AF4 A0A3C0MJE2-F1 Eubacterium sp 91.4 Histidine kinase
83 AF4 A0A349AQD1-F1 Eubacterium sp 91.3 Histidine kinase
83 AF4 A0A3D5LWM4-F1 Eubacterium sp 91.2 Tetratricopeptide repeat protein
83 AF4 D4RW45-F1 Butyrivibrio crossotus 91.2 Tetratricopeptide repeat protein
83 AF4 A0A352T5L1-F1 Eubacterium sp 91.1 HEAT repeat domain-containing protein
83 AF4 A0A174YUC6-F1 Lachnospira pectinoschiza 90.9 Tetratricopeptide repeat protein
83 AF4 R6JT76-F1 Eubacterium sp 90.8 HEAT repeat domain-containing protein
83 AF4 A0A3D2DHZ9-F1 Eubacterium sp 90.5 HEAT repeat domain-containing protein
83 AF4 A0A4R1MXB5-F1 Natranaerovirga hydrolytica 89.9 Type I restriction endonuclease subunit R
83 AF4 A0A416E8K6-F1 Lachnotalea sp 89.3 Histidine kinase
83 AF4 A0A4R3MU74-F1 Natranaerovirga pectinivora 89.0 Type I restriction enzyme R protein
83 AF4 A0A844J8B6-F1 Hungatella sp 86.8 Type I restriction endonuclease subunit R
83 AF4 A0A1S9CFG8-F1 Epulopiscium sp 83.7 Importin N-terminal domain-containing protein
83 AF4 A0A158P751-F1 Rat lungworm 66.5 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
81 AF4 A0A3B9FMV5-F1 Opitutae bacterium 93.6 T5orf172 domain-containing protein
81 ESM1 A0A3B9FMV5-F1 Opitutae bacterium 75.5 T5orf172 domain-containing protein
75 AF4 A0A1I8IKD3-F1 Macrostomum lignano 74.9 Fatty acyl-CoA reductase (EC 1.2.1.84)
75 AF4 A0A820UB67-F1 Rotaria sp 70.6 Hypothetical protein
75 AF1-Artifact A0A0P0XPM5-F1 Orysj 36.9 Os09g0473300 protein
72 AF4 A0A3Q7UYR0-F1 Ursus arctos 71.0 Gamma-glutamylcyclotransferase (EC 4.3.2.7)
72 ESM1 A0A3B0WDM5-F1 hydrothermal vent 44.1 DUF3127 domain-containing protein
72 ESM1 P73136-F1 Synechocystis sp. 33.8 Uncharacterized protein slr1025
72 ESM1 A0A3B0SZW9-F1 hydrothermal vent 33.6 NmrA domain-containing protein
72 ESM1 D1AG90-F1 Sebaldella termitidis 28.4 DUF4377 domain-containing protein
71 AF4 A0A815IVN2-F1 Didymodactylos carnosus 84.9 NAD(P)(+)--arginine ADP-ribosyltransferase (EC 2.4.2.31) (Mono(ADP-ribosyl)transferase)
63 AF4 B4VIU3-F1 Coleofasciculus chthonoplastes 91.3 Vault protein inter-alpha-trypsin
63 AF4 A0A6N8X9F5-F1 Gammaproteobacteria bacterium 84.8 VWA domain-containing protein
63 AF4 A0A2J6PSV2-F1 Hyaloscypha hepaticicola 80.1 Caspase family protein
62 AF4 A0A2S6IPP3-F1 Kineococcus xinjiangensis 74.6 DUF4132 domain-containing protein
62 AF4 A0A401SSZ3-F1 Brownbanded bambooshark 72.9 Solute carrier family 24 member 4
61 AF4 E0AEW4-F1 Pseudomonas sp 96.9 Putative R-2-chloropropionic acid specific dehalogenase (EC 3.8.1.9)
61 AF4 A0A359D6R4-F1 Pseudomonas sp 96.8 (R)-2-haloacid dehalogenase
61 AF4 V4Q3Q2-F1 Pseudomonas chloritidismutans 96.7 (R)-2-haloacid dehalogenase
61 AF4 A0A2E9B0N2-F1 Pseudomonas sp 96.6 (R)-2-haloacid dehalogenase
61 AF4 A0A2N2RJ54-F1 Betaproteobacteria bacterium 96.1 (R)-2-haloacid dehalogenase
61 AF4 A0A832XQL8-F1 Candidatus Poseidoniales 95.2 GIY-YIG nuclease family protein
61 AF4 A0A2S6RCV9-F1 Alphaproteobacteria bacterium 95.2 (R)-2-haloacid dehalogenase (EC 3.8.1.9)
61 AF4 A0A1H1WC18-F1 Bradyrhizobium canariense 94.3 DUF4243 domain-containing protein
61 AF4 A0A2D9JMG8-F1 Gammaproteobacteria bacterium 91.9 Urease accessory protein UreF
61 AF4 A0A2E3L493-F1 Magnetovibrio sp 91.4 Uncharacterized protein
61 AF4 A0A5N8ZC65-F1 SAR202 cluster 91.0 Uncharacterized protein
61 AF4 A0A2E6NUH5-F1 Chloroflexi bacterium 90.8 Uncharacterized protein
61 AF4 A0A5N9E402-F1 SAR202 cluster 90.7 Uncharacterized protein
61 ESM1 L7V9C2-F1 strain 128FXT 89.9 2-haloacid dehalogenase
61 ESM1 A0A6N6L742-F1 Proteobacteria bacterium 87.8 Iron-containing redox enzyme family protein
61 ESM1 A0A2E5PN85-F1 Rhodospirillaceae bacterium 87.4 Questin oxidase family protein
61 ESM1 A0A2S6QQ15-F1 Alphaproteobacteria bacterium 87.3 NAD_binding_4 domain-containing protein
61 AF4 A0A6A6I275-F1 Trematosphaeria pertusa 87.0 DUF946 domain-containing protein
61 ESM1 A0A1M7UQH4-F1 Bradyrhizobium erythrophlei 85.6 Urease accessory protein UreF
61 ESM1 A0A6L8E3W1-F1 Chloroflexi bacterium 84.9 Rab-GAP TBC domain-containing protein
61 AF4 A0A5N5KMX8-F1 Salix brachista 78.9 LRRNT_2 domain-containing protein
61 AF4 A0A3B3SVN6-F1 Paramormyrops kingsleyae 76.9 Serpin H1 (Collagen-binding protein)
61 AF4 A0A0S8FYS2-F1 candidate division 72.3 Serine protease
61 ESM1 A0A2N5G296-F1 Bacillus sp 51.4 SLT domain-containing protein
52 AF4 X6P1H9-F1 Reticulomyxa filosa 96.4 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 L7I479-F1 strain Y34 96.2 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A4P7NHY0-F1 Rice blast fungus 96.1 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A086T5L9-F1 Acremonium chrysogenum 95.8 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 G4N846-F1 Rice blast fungus 95.7 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A1S3BKK2-F1 Muskmelon 95.6 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A168KJW8-F1 Mucor lusitanicus CBS 277 95.5 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A7S1C7C4-F1 Bicosoecida sp 95.4 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A5A7TC70-F1 Cucumis melo var 95.3 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A445ASA2-F1 Peanut 95.3 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A1V6SR02-F1 Penicillium steckii 95.2 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
How to cite