AlphaKnot 2.0
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Found:
...COUNTING...
knotted stuctures in
AlphaKnot 2.0
. Displaying
1 - 100
. No filters applied
Browse database  
All
AF4
ESM1
AF1 Knots
AF1 Unsure
AF1 Artifacts
AF1 Unassigned
Search results
Knot core between 300 and 301
Knot type
Category
Uniprot
Organism
pLDDT knotcore
Protein name
8
19
AF4
Q3SU18-F1
Nitrobacter winogradskyi
89.7
Type I secretion protein
8
19
AF4
A0A562F8V5-F1
Aminobacter sp
88.2
Type I secretion protein
8
19
AF4
A0A2E0J7A0-F1
Nitratireductor sp
87.6
Type I secretion protein
8
19
AF4
A0A3S3T1S2-F1
Agrobacterium sp
86.9
Type I secretion protein
8
19
AF4
A0A1S7R5Z0-F1
Agrobacterium tumefaciens str
86.7
Type I secretion protein
8
19
AF4
A0A822V8D6-F1
Agrobacterium tumefaciens str
86.7
Type I secretion protein
8
19
AF4
A0A4U1KJJ7-F1
Agrobacterium tumefaciens
86.5
Type I secretion protein
8
19
AF4
A0A1S7U1T8-F1
Agrobacterium deltaense
86.5
Type I secretion protein
8
19
AF4
A0A7W8Y3U0-F1
Agrobacterium tumefaciens
86.5
Type I secretion protein
8
19
AF4
A0A4Z1QRN3-F1
Agrobacterium salinitolerans
86.4
Type I secretion protein
8
19
AF4
A0A846LAT1-F1
Agrobacterium sp
86.3
Type I secretion protein
8
19
AF4
A0A2L2LG69-F1
Agrobacterium tumefaciens
86.2
Type I secretion protein
8
19
AF4
A0A5D9CSV3-F1
Agrobacterium sp. B1
86.2
Type I secretion protein
8
19
AF4
A0A420FTB6-F1
Agrobacterium deltaense
86.1
Type I secretion protein
8
19
AF4
A0A1S7RW27-F1
Agrobacterium deltaense
86.1
Type I secretion protein
8
19
AF4
A0A546YFB8-F1
Agrobacterium tumefaciens
86.0
Type I secretion protein
8
19
AF4
A0A5B8KKN8-F1
Agrobacterium tumefaciens
85.9
Type I secretion protein
8
19
AF4
A0A1S7UDD2-F1
Agrobacterium salinitolerans str
85.7
Type I secretion protein
8
19
AF4
A0A1U7JJ93-F1
Pseudovibrio exalbescens
85.6
Cadherin domain-containing protein
8
19
AF4
M8ABW9-F1
Agrobacterium tumefaciens str
85.5
Type I secretion protein
8
19
AF4
A0A4Z1Q9X6-F1
Agrobacterium tumefaciens
85.3
Type I secretion protein
8
19
AF4
A0A246SVR3-F1
Rhizobium sp
83.1
Type I secretion protein
7
1
AF4
A0A2K9NRE2-F1
Bdellovibrio stolpii
81.2
YadA_anchor domain-containing protein
5
2
AF4
A0A7S0S751-F1
Chlamydomonas leiostraca
90.1
Hypothetical protein
5
2
AF4
A0A844ZC70-F1
Parapontixanthobacter aurantiacus
83.9
Autotransporter domain-containing protein
5
2
AF4
A0A0L0MAZ6-F1
Candidatus Burkholderia
83.7
Na+/H+ antiporter
5
2
AF4
A0A1L7VQE4-F1
strain ET1
82.8
Ubiquitin-like domain-containing protein
5
2
AF4
A0A5K1VTI9-F1
strain H
81.4
Ubiquitinyl hydrolase 1 (EC 3.4.19.12)
5
2
AF4
A0A1Y3DJL5-F1
Plasmodium knowlesi
81.4
Ubiquitinyl hydrolase 1 (EC 3.4.19.12)
5
2
AF4
A0A384LBJ8-F1
strain H
80.8
Ubiquitinyl hydrolase 1 (EC 3.4.19.12)
5
2
ESM1
A0A1I8NR13-F1
Stable fly
79.8
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
5
2
AF4
A0A420MXA9-F1
Fusarium vascular wilt
78.0
Ubiquitin-like domain-containing protein
5
2
AF4
M3WJT5-F1
Cat
59.9
Integrin subunit alpha 7
5
1
AF4
I2H2A2-F1
Yeast
84.6
Methyltransferase
5
1
AF4
A0A5D6Y9S9-F1
nom. inval.
66.4
HECT domain-containing protein
4
1
AF4
A0A0L9V592-F1
Azuki bean
96.1
Acetohydroxy-acid reductoisomerase (Alpha-keto-beta-hydroxylacyl reductoisomerase)
4
1
AF4
A0A1I6ZWK6-F1
Arthrobacter sp
88.9
NAD-dependent protein deacetylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog)
4
1
AF4
A0A7J9GZP3-F1
Gossypium harknessii
88.6
PHYTOCHROME_2 domain-containing protein
4
1
AF4
A0A5C3E3J7-F1
Ustilago trichophora
87.5
Related to KRE6 - glucan synthase subunit
4
1
AF4
A0A6G0Z5Y1-F1
Cowpea aphid
86.1
Retinaldehyde-binding protein 1 isoform X1
4
1
AF4
A0A1R3GUP0-F1
Corchorus olitorius
86.1
Phytochrome
4
1
AF4
A0A7J8XHN3-F1
American cotton
85.9
Phytochrome
4
1
AF4
A0A3D8QKJ9-F1
Coleophoma cylindrospora
84.1
NCS1 nucleoside transporter family
4
1
AF4
A0A5J9T343-F1
weeping love grass
83.6
PHYTOCHROME_2 domain-containing protein
4
1
AF4
A0A2I0IVM8-F1
Pomegranate
83.3
Phytochrome
4
1
ESM1
D4B2E8-F1
Trichophyton mentagrophytes
83.2
tRNA wybutosine-synthesizing protein 4 (EC 2.1.1.290) (EC 2.3.1.231) (tRNA(Phe) (7-(3-amino-3-(methoxycarbonyl)propyl)wyosine(37)-N)-methoxycarbonyltransferase) (tRNA(Phe) (7-(3-amino-3-carboxypr...
4
1
AF4
A0A0K0NQG7-F1
Syntrichia princeps
83.2
Phytochrome
4
1
AF4
V4MK39-F1
Saltwater cress
83.1
Phytochrome
4
1
AF4
A0A2P2J8P7-F1
Asiatic mangrove
83.1
Phytochrome
4
1
AF1-Knot
P19862-F1
Maize
83.1
Phytochrome A
4
1
AF4
A0A0K0NQT7-F1
Common box
83.0
Phytochrome
4
1
AF4
E4S9E5-F1
Caldicellulosiruptor kristjanssonii
83.0
KWG repeat protein
4
1
AF4
A0A1V5UH55-F1
Tenericutes bacterium ADurb
83.0
Lipoprotein
4
1
AF4
A0A0R0G179-F1
Soybn
83.0
Phytochrome
4
1
AF4
A0A4P8PIF0-F1
Common ragweed
82.7
Phytochrome
4
1
AF4
A0A7N2MAQ7-F1
Valley oak
82.5
Phytochrome
4
1
AF4
Q717V7-F1
Longstalk starwort
82.5
Phytochrome
4
1
AF4
A0A067JVA7-F1
Barbados nut
82.4
Phytochrome
4
1
AF4
A0A2G2WCZ7-F1
Peruvian pepper
82.4
Phytochrome
4
1
AF4
A0A2G2Z1H0-F1
Capsicum pepper
82.3
Phytochrome
4
1
AF4
A0A2G3BYC7-F1
Scotch bonnet
82.3
Phytochrome
4
1
AF4
A0A1U8B3F3-F1
Sacred lotus
82.2
Phytochrome
4
1
AF4
A0A6N2B900-F1
Tomato
82.1
Phytochrome
4
1
AF4
A0A438IEH4-F1
Grape
82.0
Phytochrome C
4
1
AF4
Q41335-F1
Tomato
82.0
Phytochrome
4
1
AF4
A0A6J0ZGC1-F1
Herrania umbratica
81.8
phytochrome C isoform X2
4
1
AF4
F6HHP7-F1
Grape
81.8
Phytochrome
4
1
AF4
A0A1Q8BVF9-F1
Actinophytocola xanthii
81.8
Peptidase_S8 domain-containing protein
4
1
AF4
A0A094EPC5-F1
Pseudogymnoascus sp
81.7
Methyltransferase type 11
4
1
AF4
S6FWC6-F1
Rhazya stricta
81.7
Phytochrome C
4
1
AF4
A0A6I9TJH8-F1
Oriental sesame
81.7
Phytochrome
4
1
AF4
A0A1U8HAL6-F1
Capsicum pepper
81.6
Phytochrome
4
1
AF4
A0A5D2X7D8-F1
Cotton
81.5
Phytochrome
4
1
AF4
A0A834GY38-F1
Sims's rhododendron
81.4
Phytochrome C
4
1
AF4
B4E140-F1
Human
81.4
Transporter
4
1
AF4
A0A6J1HW87-F1
Pumpkin
81.3
Phytochrome
4
1
AF4
A0A6P9ELI4-F1
English walnut
81.3
Phytochrome
4
1
AF4
A0A0A0K6F8-F1
Cucumber
81.0
Phytochrome
4
1
AF4
A0A4Y7IF80-F1
Opium poppy
80.9
Phytochrome
4
1
AF4
A0A5J5TNJ2-F1
Sea-island cotton
80.9
Phytochrome
4
1
AF4
A0A6J1GK19-F1
Winter crookneck squash
80.8
Phytochrome
4
1
AF4
A0A846HR85-F1
Halochromatium sp
80.6
Diguanylate cyclase
4
1
AF4
A0A7J9FVX3-F1
Gossypium trilobum
80.5
Phytochrome
4
1
AF4
A0A2T6CRI9-F1
Spartobacteria bacterium
80.5
ABC transporter domain-containing protein
4
1
AF4
A0A5D2SM36-F1
Cotton
80.4
Hydrolase_4 domain-containing protein
4
1
AF4
A0A165Z8K4-F1
Carrot
80.0
Phytochrome
4
1
AF4
A0A1R3GJ61-F1
Jute
79.7
Phytochrome
4
1
AF4
A0A7N2R2Q4-F1
Valley oak
78.1
Neprosin
4
1
AF1-Knot
P42500-F1
Soybn
78.1
Phytochrome A
4
1
AF4
A0A1I5G4G0-F1
Pantoea sp
76.9
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein
4
1
AF4
A0A024V962-F1
FVO
75.6
Dihydropteroate synthase
4
1
AF4
A0A671YY29-F1
Gilthead sea bream
75.5
Solute carrier family 5 member 8, like
4
1
AF4
C0J3L7-F1
Plasmodium falciparum
75.4
7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase-dihydropteroate synthase
4
1
AF4
A0A024VSI8-F1
Plasmodium falciparum
75.4
Dihydropteroate synthase
4
1
AF4
Q25704-F1
Plasmodium falciparum
75.4
7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase-dihydropteroate synthase (Dihydropteroate synthetase)
4
1
AF4
A0A4W5N997-F1
huchen
74.9
Solute carrier family 5 member 8, like
4
1
AF4
A0A024WRR0-F1
Plasmodium falciparum
74.5
Dihydropteroate synthase
4
1
AF4
Q25866-F1
Plasmodium falciparum
74.4
Dihydropterin pyrophosphokinase and Dihydropteroate synthetase
4
1
AF4
A0A6I8QP67-F1
Western clawed frog
73.8
Solute carrier family 35 member B3 (adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X2)
4
1
AF4
A0A084AF09-F1
Toxic black mold
73.3
General alpha-glucoside permease
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