Found: ...COUNTING... knotted stuctures in AlphaKnot 2.0. Displaying 101 - 200. No filters applied
Search results C-end knot depth between 0 and 1
Knot type Category Uniprot Organism pLDDT knotcore Protein name
52 AF4 A0A7V3AB97-F1 Planctomycetes bacterium 89.0 Peptide transporter
52 AF4 A0A2E3Y874-F1 Gemmatimonadetes bacterium 88.9 MFS transporter
52 ESM1 A0A284S427-F1 Armillaria root rot fungus 88.8 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A2H3EMH9-F1 Bulbous honey fungus 88.5 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A2E4MVH9-F1 Gemmatimonadetes bacterium 88.1 MFS transporter
52 AF4 A0A1V5I6P1-F1 Synergistetes bacterium ADurb 88.1 Tripartite tricarboxylate transporter TctA family protein
52 AF4 A0A3D2K1F7-F1 Gammaproteobacteria bacterium 87.9 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
52 AF4 A0A2E6I476-F1 Gemmatimonadetes bacterium 87.3 DUF4328 domain-containing protein
52 AF4 A0A6B1BSY1-F1 Gemmatimonadetes bacterium 87.2 RDD domain-containing protein
52 ESM1 A0A4U6X5K6-F1 Colletotrichum tanaceti 87.1 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A7R8W5K4-F1 Cyprideis torosa 86.9 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A5M3YUA9-F1 Aspergillus terreus 86.9 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A7S2KTA0-F1 Skeletonema marinoi 86.6 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A1Y1JZ11-F1 Common eastern firefly 86.5 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A800IPV6-F1 candidate division 86.5 YYY membrane protein
52 ESM1 A0A7H8R1Z2-F1 Talaromyces rugulosus 86.4 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A267GB74-F1 Macrostomum lignano 86.2 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A267FVD0-F1 Macrostomum lignano 85.9 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 H2LUP9-F1 Japanese rice fish 85.7 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 R8BHQ0-F1 strain UCR-PA7 85.3 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A0J9XCS9-F1 Oospora lactis 85.2 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A5M8G5K6-F1 Pseudomonas lactis 84.5 Flavodoxin
52 AF4 A0A520YGA4-F1 Sphingomonadaceae bacterium 84.2 TraB/GumN family protein
52 AF4 A0A2Z4AEA4-F1 Candidatus Moanabacter 84.1 Sulfatase domain-containing protein
52 ESM1 A0A1Q3E6B2-F1 Shiitake mushroom 82.8 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A1Q4HLP2-F1 Mycobacterium diernhoferi 82.1 Integral membrane protein
52 AF4 A0A7K3QSG5-F1 Streptomyces bauhiniae 81.0 Integral membrane protein
52 ESM1 A0A3P8UR93-F1 Tongue sole 80.1 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A5S9IL20-F1 Candidatus Uabimicrobium 79.5 Protein kinase
52 AF4 A0A6H0UGG1-F1 Lactococcus raffinolactis 78.2 MucBP_2 domain-containing protein
52 AF4 A0A194PNF8-F1 Asian swallowtail butterfly 77.6 Protein argonaute-4
52 AF4 A0A1I4TXI8-F1 Variovorax sp 77.3 Type VI secretion system protein ImpL
52 AF4 A0A1Q9N845-F1 strain LCB_4 77.1 V-type ATP synthase subunit I
52 AF4 A0A4V1X5V4-F1 Alternaria tenuissima 76.7 RING-type domain-containing protein
52 AF4 A0A5N6U3U1-F1 Aspergillus avenaceus 75.3 Regulator of G protein signaling superfamily
52 AF4 A8N2Q5-F1 Inky cap fungus 74.8 Nucleoporin Pom152
52 AF4 A0A5A8EE32-F1 Marine flagellate 74.5 Oligopeptide transporter
52 AF4 A0A843WYS1-F1 Wild taro 74.4 CYTH domain-containing protein
52 AF4 K5VSQ4-F1 White button mushroom 73.8 AB hydrolase-1 domain-containing protein
52 AF4 A0A4R2RCU3-F1 Heliophilum fasciatum 70.8 Vault protein inter-alpha-trypsin-like protein
52 ESM1 A0A4Q6DJK8-F1 Proteobacteria bacterium 64.8 TraB/GumN family protein
52 ESM1 A0A6H5GZ75-F1 Nesidiocoris tenuis 63.8 Ubiquitin carboxyl-terminal hydrolase calypso (EC 3.4.19.12) (BAP1 homolog)
52 ESM1 A0A081RE93-F1 Sphingobium chlorophenolicum 61.8 GumN family protein
52 ESM1 A0A356R9Y6-F1 Nitrospiraceae bacterium 60.9 TraB/GumN family protein
52 ESM1 A0A2S9KTC3-F1 Burkholderia ambifaria 60.1 TraB/GumN family protein
52 ESM1 A0A5N5HPS1-F1 Pyrus ussuriensis 49.1 Aspartic proteinase CDR1-like
52 ESM1 A0A2I1CH43-F1 strain IBT 16806 46.0 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
51 AF4 A0A1B2Z8M6-F1 uncultured bacterium 94.0 Group-specific protein
51 AF4 A0A381RJZ7-F1 marine metagenome 88.6 PDDEXK_1 domain-containing protein
51 AF4 A0A849KXM4-F1 Halovulum dunhuangense 86.9 DUF4258 domain-containing protein
51 AF4 A0A7D6IEX9-F1 Pseudomonas chlororaphis subsp 84.7 PepSY domain-containing protein
51 AF4 A0A2G6PJ65-F1 Bacteroidia bacterium 83.2 PH domain-containing protein
51 AF4 A0A418M6S1-F1 Fibrisoma montanum 81.6 PAS domain S-box protein
51 AF4 A0A7X4CLZ1-F1 Gemmatimonadetes bacterium 79.4 Sulfatase-like hydrolase/transferase
51 AF4 A0A7X9YWI3-F1 Xanthomonas hortorum pv 79.4 Methyl-accepting chemotaxis protein
51 AF4 A0A794W4L4-F1 Escherichia coli 74.7 DarA
51 AF4 A0A6P3J9N0-F1 Bison bison 73.8 protein FAM184A isoform X1
51 AF4 A0A5A8CLI1-F1 Marine flagellate 65.8 Fibrinogen-binding protein
51 AF4 A0A3B5ZXW3-F1 Wheat 60.9 SNF2 family N-terminal domain-containing protein
51 ESM1 A0A7L0TPM1-F1 Lesser nighthawk 59.1 Carbonic anhydrase 4 (Carbonate dehydratase IV) (Carbonic anhydrase IV)
51 ESM1 T0F1P6-F1 Leptospira broomii serovar Hurstbridge str 33.5 Secreted protein
41 ESM1 A0A6I5C6S2-F1 Streptomyces sp 93.9 Amino acid permease
41 AF4 A0A7K9HEG9-F1 collared puffbird 93.8 Transporter
41 AF4 A0A7L0BS98-F1 black hawk-eagle 93.7 Transporter
41 ESM1 A0A7C5RAI0-F1 Bacteroidetes bacterium 93.7 Sodium:solute symporter
41 AF4 A0A7L3U0B3-F1 Common mure 93.6 Transporter
41 AF4 A0A0L8F087-F1 Clostridium sp 92.9 FeMo cofactor biosynthesis protein NifB (Nitrogenase cofactor maturase NifB) (Radical SAM assemblase NifB)
41 AF4 A0A7K5CZ72-F1 Pachyramphus minor 92.8 Transporter
41 AF4 A0A3M1BK83-F1 Aquificae bacterium 92.1 Carbon starvation protein A
41 AF4 A0A850WFW0-F1 Magnificent frigatebird 91.9 Transporter
41 AF4 A0A3N8CLG1-F1 Burkholderia sp 91.2 VWA domain-containing protein
41 AF4 A0A426DIN6-F1 Schaedlerella arabinosiphila 91.1 TGc domain-containing protein
41 AF4 A0A2R5F8B6-F1 Novimethylophilus kurashikiensis 90.8 Iron-sulfur cluster carrier protein
41 ESM1 A0A6N8VBW8-F1 Gemmatimonadetes bacterium 90.7 Sodium-dependent transporter
41 AF4 A0A845KVW8-F1 Dorea sp 90.6 TGc domain-containing protein
41 AF4 A0A7L9TPN4-F1 Bifidobacterium longum subsp 90.2 ABC transporter family substrate-binding protein
41 ESM1 A0A2D7TAZ6-F1 Euryarchaeota archaeon 90.1 Sodium-dependent transporter
41 AF4 A0A7Y6D9G1-F1 Pseudomonas sp 89.8 Carbon starvation protein A
41 AF4 A0A104Z7A6-F1 Burkholderia ubonensis 89.3 VWFA domain-containing protein
41 AF4 A0A822Z437-F1 Sacred lotus 89.0 Peptidase_S9 domain-containing protein
41 AF4 A0A450S276-F1 Candidatus Kentron sp 88.9 Coproporphyrinogen-III oxidase (EC 1.3.98.3)
41 AF4 A0A1I6ZWK6-F1 Arthrobacter sp 88.9 NAD-dependent protein deacetylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog)
41 AF4 A0A2N5NER0-F1 Ruminococcus gnavus 88.7 Fibronectin type-III domain-containing protein
41 AF4 E5QYJ6-F1 Microsporum gypseum 88.3 tRNA wybutosine-synthesizing protein 4 (EC 2.1.1.290) (EC 2.3.1.231) (tRNA(Phe) (7-(3-amino-3-(methoxycarbonyl)propyl)wyosine(37)-N)-methoxycarbonyltransferase) (tRNA(Phe) (7-(3-amino-3-carboxypr...
41 AF4 A0A5N6TJH7-F1 Aspergillus avenaceus 88.3 tRNA wybutosine-synthesizing protein 4 (EC 2.1.1.290) (EC 2.3.1.231) (tRNA(Phe) (7-(3-amino-3-(methoxycarbonyl)propyl)wyosine(37)-N)-methoxycarbonyltransferase) (tRNA(Phe) (7-(3-amino-3-carboxypr...
41 AF4 A0A1S8TQE4-F1 Clostridium puniceum 88.1 FeMo cofactor biosynthesis protein NifB (Nitrogenase cofactor maturase NifB) (Radical SAM assemblase NifB)
41 AF4 A0A450SAJ7-F1 Candidatus Kentron sp 88.0 Coproporphyrinogen-III oxidase (EC 1.3.98.3)
41 AF4 A0A1B6LUP4-F1 Graphocephala atropunctata 88.0 Transmembrane protein
41 AF4 A0A3C0T121-F1 Spirochaeta sp 88.0 YD repeat-containing protein
41 AF4 A0A1B6GG06-F1 Cuerna arida 87.7 Transmembrane protein
41 AF4 A0A1V5I3M4-F1 Synergistetes bacterium ADurb 87.6 VWFA domain-containing protein
41 AF4 A0A0S7H020-F1 blackstripe livebearer 87.3 Transporter
41 AF4 F5YEM2-F1 Treponema azotonutricium 87.3 FeMo cofactor biosynthesis protein NifB (Nitrogenase cofactor maturase NifB) (Radical SAM assemblase NifB)
41 AF4 A0A841GH07-F1 Tolumonas osonensis 87.0 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
41 AF4 A0A7C2UWU5-F1 Armatimonadetes bacterium 86.9 tRNA-splicing ligase RtcB (EC 6.5.1.-)
41 AF4 A0A1S6J661-F1 Streptomyces pactum 86.9 ABC transporter substrate-binding protein
41 AF4 A0A3D3CKJ7-F1 Synergistaceae bacterium 86.6 Membrane protein YkvI
41 AF4 E1YA76-F1 uncultured Desulfobacterium 86.5 Methyltransf_11 domain-containing protein
41 AF4 A0A1M6FN36-F1 Clostridium cavendishii 86.3 DNA-directed DNA polymerase
41 AF4 A0A1A3BQ71-F1 Mycobacterium asiaticum 86.2 Histidine kinase
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