AlphaKnot 2.0: Knots on AlphaFold generated structures

Found: ...COUNTING... knotted stuctures in AlphaKnot 2.0. Displaying 1 - 100. Applied filters: Categories: AF4

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Knot type	Category	Uniprot	Organism	pLDDT knotcore	Protein name
3₁#3₁	AF4	A0A073ITS3-F1	Synergistes jonesii	95.3	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
3₁#3₁	AF4	A0A1Y4GDQ0-F1	Cloacibacillus sp	94.5	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
3₁#3₁	AF4	A0A1J5MTY0-F1	Pseudodesulfovibrio hydrargyri	92.7	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
3₁#3₁	AF4	A0A2E5ASF1-F1	bacterium	91.9	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
4₁	AF4	A0A0L9V592-F1	Azuki bean	96.1	Acetohydroxy-acid reductoisomerase (Alpha-keto-beta-hydroxylacyl reductoisomerase)
4₁	AF4	A0A1I6ZWK6-F1	Arthrobacter sp	88.9	NAD-dependent protein deacetylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog)
4₁	AF4	A0A7J9GZP3-F1	Gossypium harknessii	88.6	PHYTOCHROME_2 domain-containing protein
4₁	AF4	A0A5C3E3J7-F1	Ustilago trichophora	87.5	Related to KRE6 - glucan synthase subunit
4₁	AF4	A0A6G0Z5Y1-F1	Cowpea aphid	86.1	Retinaldehyde-binding protein 1 isoform X1
4₁	AF4	A0A1R3GUP0-F1	Corchorus olitorius	86.1	Phytochrome

Showing 1 to 10 of 100 entries

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