AlphaKnot 2.0: Knots on AlphaFold generated structures

Found: ...COUNTING... knotted stuctures in AlphaKnot 2.0. Displaying 1 - 100. Applied filters: Categories: AF4

Search results N-end knotoid depth between 0 and 1

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Knot type	Category	Uniprot	Organism	pLDDT knotcore	Protein name
5₂	AF4	A0A7H8R1Z2-F1	Talaromyces rugulosus	94.5	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
5₂	AF4	A0A6A6A020-F1	Dothidotthia symphoricarpi	94.3	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
5₂	AF4	A0A0C3ALD5-F1	strain F 1598	92.8	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
5₂	AF4	A0A2H3EMH9-F1	Bulbous honey fungus	92.6	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
5₂	AF4	U1GRJ3-F1	Lichen-forming fungus	91.7	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
5₂	AF4	A0A496CAP0-F1	Parabacteroides sp	91.4	DUF1080 domain-containing protein
5₂	AF4	A0A1Q3E6B2-F1	Shiitake mushroom	91.3	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
5₂	AF4	S9QWV0-F1	strain yFS286	90.2	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
5₂	AF4	A0A2D6S0P7-F1	Candidatus Poribacteria	89.9	Inner membrane protein
5₂	AF4	A0A4Q4U627-F1	Monosporascus sp	89.6	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)

Showing 1 to 10 of 100 entries

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