Found: ...COUNTING... knotted stuctures in AlphaKnot 2.0. Displaying 1 - 100. No filters applied
Search results C-end knot depth between 25 and 26
Knot type Category Uniprot Organism pLDDT knotcore Protein name
Unknown AF4 A0A7W1YNU4-F1 Herpetosiphonaceae bacterium 82.1 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A2N0MU94-F1 SAR202 cluster 73.5 6-bladed beta-propeller
Unknown AF1-Artifact F1QZF2-F1 Danre 59.2 Notch receptor 3
Unknown AF1-Artifact A0A0R4IQW1-F1 Danre 58.4 Si:ch211-276i12.4
Unknown AF1-Artifact A0A1D6FUL5-F1 Maize 49.2 BRCT domain-containing DNA repair protein
Unknown AF1-Artifact K7MHF2-F1 Soybn 47.2 DEUBAD domain-containing protein
Unknown AF1-Artifact Q9VXS2-F1 Drome 45.1 Uncharacterized protein
Unknown AF1-Unassigned Q01484-F8 Human 42.6 Ankyrin-2
Unknown AF1-Artifact F1QGD0-F1 Danre 42.6 PCF11 cleavage and polyadenylation factor subunit
Unknown AF1-Artifact A0A1D6L6Z4-F1 Maize 35.8 Nuclear pore complex protein NUP1
917 AF4 K7ZGZ8-F1 Bdellovibrio bacteriovorus str 71.8 Putative TolB protein
91 AF4 A0A3S1DAA5-F1 Legionella sp 79.0 NHL repeat protein
83 AF4 A0A7X8HWL1-F1 Epulopiscium sp 89.7 Histidine kinase
821 AF4 R7KL59-F1 Sutterella sp 77.9 Histidine kinase (EC 2.7.13.3)
819 AF4 A0A7V9HVD9-F1 Pyrinomonadaceae bacterium 74.3 Non-specific serine/threonine protein kinase (EC 2.7.11.1)
81 ESM1 A0A1S2L2G9-F1 Anaerobacillus isosaccharinicus 95.0 DUF4099 domain-containing protein
81 AF4 A0A5M8REC4-F1 Bacillus swezeyi 93.8 FRG domain-containing protein
81 AF4 A0A417YQ24-F1 Neobacillus notoginsengisoli 93.2 Type I site-specific deoxyribonuclease
81 AF4 A0A160MI10-F1 Cytobacillus oceanisediminis 92.8 Type II restriction endonuclease
81 AF4 A0A2E7CZ90-F1 Planctomycetaceae bacterium 91.4 DUF3883 domain-containing protein
81 AF4 A0A2S6NQA0-F1 Paenibacillus peoriae 87.4 DUF4263 domain-containing protein
74 AF4 A0A7Y5VXP6-F1 Phycisphaerales bacterium 76.7 Type II secretion system protein GspG
72 AF4 A0A5A9PSE6-F1 Triplophysa tibetana 77.1 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
72 ESM1 A0A1F3Q3U4-F1 Bacteroidetes bacterium 55.8 Secreted protein
71 AF4 A0A1N6ZF92-F1 Maribacter ulvicola 93.9 DUF2846 domain-containing protein
71 AF4 A0A3D0EHG6-F1 Pantoea sp 81.4 Phage_base_V domain-containing protein
63 AF4 A0A815AC30-F1 Rotaria sordida 82.0 Hypothetical protein
63 AF4 A0A3Q0SF56-F1 Midas cichlid 71.7 Golgin subfamily A member 5 (Golgin-84)
62 AF4 A0A839HP61-F1 Aquariibacter albus 83.8 TraB/GumN family protein
62 AF4 A0A3D5M4L6-F1 Planctomycetes bacterium 75.3 TraB/GumN family protein
62 AF4 A0A0D3ENY5-F1 Oryza barthii 72.4 Cytochrome P450 71D7
62 AF4 A0A820S9W2-F1 Rotaria sp 70.0 Hypothetical protein
61 AF4 A0A7Y9E0V2-F1 Actinomycetospora corticicola 97.1 CMD domain-containing protein
61 AF4 A0A7C5IIS7-F1 Anaerolineae bacterium 95.4 DUF885 domain-containing protein
61 ESM1 A0A7Y9E0V2-F1 Actinomycetospora corticicola 94.7 CMD domain-containing protein
61 ESM1 A0A2N5KKI9-F1 Actinomycetia bacterium 92.7 Halocarboxylic acid dehydrogenase DehI
61 AF4 A0A7X8EV65-F1 Epulopiscium sp 91.1 Death domain-containing protein
61 AF4 A0A453Q325-F1 Goatgrass 90.8 3-ketoacyl-CoA thiolase 2, peroxisomal
61 AF4 A0A507QUX0-F1 Red mold 82.0 Vacuolar protein sorting-associated protein 62
61 AF4 A0A3M7MPJ2-F1 Chaetothyriales sp 81.9 Vacuolar protein sorting-associated protein 62
52 AF4 A0A1V8SQK6-F1 Rachicladosporium antarcticum 94.6 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 S0EUZ9-F1 Chthonomonas calidirosea 93.8 TPR_REGION domain-containing protein
52 AF4 A0A7C2SZX0-F1 Armatimonadetes bacterium 93.7 TPR_REGION domain-containing protein
52 AF4 A0A7V1Q514-F1 Armatimonadetes bacterium 93.6 CAAX protease self-immunity
52 AF4 A0A7C4ZCP1-F1 Armatimonadetes bacterium 93.5 TPR_REGION domain-containing protein
52 AF4 A0A2C5ZEQ2-F1 Cordyceps sp 93.4 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A2H5X3P5-F1 bacterium HR16 93.4 Peptide transporter
52 AF4 A0A7C2QDY2-F1 Armatimonadetes bacterium 93.3 TPR_REGION domain-containing protein
52 AF4 A0A7V1Q2L9-F1 Armatimonadetes bacterium 93.3 Galactan 5-O-arabinofuranosyltransferase
52 AF4 A0A7X6XKM8-F1 Armatimonadetes bacterium 93.2 DUF4129 domain-containing protein
52 AF4 A0A7X6W2J6-F1 Armatimonadetes bacterium 93.2 DUF2156 domain-containing protein
52 AF4 A0A800AE53-F1 Candidatus Poribacteria 93.0 ABC transporter permease
52 AF4 A0A2H5X7L5-F1 bacterium HR16 92.8 ABC transporter permease
52 AF4 A0A7V4XHB9-F1 Armatimonadetes bacterium 92.8 Cyclic nucleotide-binding domain-containing protein
52 AF4 A0A2H5XAF2-F1 bacterium HR17 92.7 DUF4129 domain-containing protein
52 AF4 A0A349USE9-F1 Phycisphaerales bacterium 92.7 Uncharacterized protein
52 AF4 A0A662SVN1-F1 Candidatus Korarchaeota 92.7 OPT family oligopeptide transporter
52 AF4 A0A7C2LCJ9-F1 Armatimonadetes bacterium 92.5 O-antigen ligase domain-containing protein
52 AF4 A0A7V4WA09-F1 Armatimonadetes bacterium 92.5 TPR_REGION domain-containing protein
52 AF4 A0A2H5XCR9-F1 bacterium HR17 92.4 Peptide transporter
52 AF4 A0A850AVH3-F1 Chthonomonadales bacterium 92.3 Peptide transporter
52 AF4 A0A2H5X1H6-F1 bacterium HR16 92.3 Galactan 5-O-arabinofuranosyltransferase
52 AF4 A0A7V1Q6I7-F1 Armatimonadetes bacterium 92.2 Galactan 5-O-arabinofuranosyltransferase
52 AF4 A0A7C3SAM5-F1 Armatimonadetes bacterium 92.1 Peptide transporter
52 AF4 A0A850AQK1-F1 Chthonomonadales bacterium 92.1 Galactan 5-O-arabinofuranosyltransferase
52 AF4 A0A7C5YEJ5-F1 bacterium 92.0 DUF2206 domain-containing protein
52 AF4 B6AC16-F1 strain RN66 91.9 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A7C3WE94-F1 Armatimonadetes bacterium 91.9 Peptide transporter
52 AF4 A0A800DNU5-F1 Candidatus Poribacteria 91.8 OPT family oligopeptide transporter
52 AF4 A0A7C3SD32-F1 Armatimonadetes bacterium 91.8 DUF4129 domain-containing protein
52 AF4 A0A662J5A0-F1 Thermoprotei archaeon 91.7 ABC transporter permease
52 AF4 A0A7Y5Q4S5-F1 Armatimonadetes bacterium 91.6 TPR_REGION domain-containing protein
52 AF4 A0A2M7KV44-F1 Armatimonadetes bacterium 91.6 TPR_REGION domain-containing protein
52 AF4 A0A1G1BZ41-F1 Lentisphaerae bacterium 91.5 TRAP transporter large permease subunit
52 AF4 A0A662SHL1-F1 Candidatus Korarchaeota 91.5 Peptide transporter
52 AF4 A0A7W9SMF7-F1 Armatimonas rosea 91.4 TPR_REGION domain-containing protein
52 AF4 A0A7C4WIA8-F1 Candidatus Bathyarchaeota 91.2 Oligopeptide transporter OPT superfamily
52 ESM1 A0A2C5ZEQ2-F1 Cordyceps sp 91.1 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A497G9I0-F1 Thermoprotei archaeon 91.1 Peptide transporter
52 AF4 A0A497G4N6-F1 Thermoprotei archaeon 91.0 Peptide transporter
52 AF4 A0A831KAG6-F1 Thermoprotei archaeon 90.9 Peptide transporter
52 ESM1 A0A819S1T1-F1 Rotaria sordida 90.9 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A660UA52-F1 Candidatus Poribacteria 90.9 MFS transporter
52 AF4 A0A662HJD7-F1 Thermoprotei archaeon 90.7 Peptide transporter
52 AF4 A0A151BCH4-F1 strain B24 90.6 OPT oligopeptide transporter protein-domain-containing protein
52 AF4 A0A662JNL4-F1 Thermoprotei archaeon 90.6 Peptide transporter
52 AF4 A0A7J3TWN4-F1 Candidatus Bathyarchaeota 90.5 OPT oligopeptide transporter protein-domain-containing protein
52 AF4 A0A2E9MMV7-F1 Gemmatimonadetes bacterium 90.5 MFS transporter
52 AF4 A0A2E8RUD5-F1 Candidatus Poribacteria 90.4 ABC transmembrane type-1 domain-containing protein
52 AF4 A0A7X3XLM6-F1 Candidatus Poribacteria 90.4 Galactan 5-O-arabinofuranosyltransferase
52 AF4 A0A2V6TN76-F1 Candidatus Rokubacteria 90.3 Peptide transporter
52 AF4 A0A497FPF3-F1 Thermoprotei archaeon 90.3 Peptide transporter
52 AF4 A0A662I5V4-F1 Thermoprotei archaeon 90.3 Peptide transporter
52 AF4 A0A7J4FB72-F1 Candidatus Bathyarchaeota 90.3 Peptide transporter
52 AF4 A0A7X4JN05-F1 Candidatus Poribacteria 90.2 Conserved domain protein
52 AF4 A0A496B982-F1 Candidatus Poribacteria 90.2 Conserved domain protein
52 AF4 A0A256XKH9-F1 strain ex4484_79 90.2 Peptide transporter
52 AF4 A0A3M2DT47-F1 Deltaproteobacteria bacterium 90.2 OPT family oligopeptide transporter
52 AF4 A0A2V7DKU4-F1 Candidatus Rokubacteria 90.1 Peptide transporter
52 AF4 A0A800AM95-F1 Candidatus Poribacteria 90.1 TPR_REGION domain-containing protein
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