Status Status Details Main knot Main knot (knot pull) Project name Input data Model lengths Last status changed Job submitted Key What to compute? Accuracy Trajectory (Knot Pull) Search Identical
FINISHED 2024-03-06 14:52:49: AF-Q9PR55-F1 - trajectory generated ... 71 (57%) 71(A)[8(+), 10(+), 12(+), 14(+), 2(+), 4(+), 6(+)](A) Recomputed from: Q9PR55-F1-AFv4 AF-Q9PR55-F1.cif
 2024-03-06 14:52:49 2024-03-06 14:50:53 a1f88e4fd46154 Knot core only Quick Yes Yes: Identity: 70%

Results for job AF-Q9PR55-F1

Topology type: KNOTTED

Information
Main knot 71 (57%)
Knot fingerprint K 71
Global pLDDT 89.4

Artifact check
Topological complexity Knot with a high (7) number of crossings
pLDDT Knot-core Very high (94.8); 100.0% has >70 pLDDT; 0.0% has <50 pLDDT
pLDDT N-end knot-core border Confident (70.7); 54.5% has >70 pLDDT; 9.1% has <50 pLDDT
pLDDT C-end knot-core border Very high (95.5); 100.0% has >70 pLDDT; 0.0% has <50 pLDDT
C-alpha clashes No clashes
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Slipknot tails Slipknot loops Main knot
94.8 12-86 74 1-11, 87-89 11 3 Knot
Model Sequence
MYNYKEVKHMGYGKGYLAMFKNKKVRFKVVNSFPDLKVQFVTSFPDYKVKISNSSSFCEETIKIQVVTSFPDVKLQKVTSFGDFEAYID
Knot Pull Trajectory
Identical Structures in AlphaKnot
Structure ID Identity Length AF4 Model Topology ESM Model Topology Organism Link
Q9PR55
97.0 %
89
71 (57%)
01 (83%)
strain ATCC 700970
A0A2C9DYA3
96.7 %
80
71 (53%)
01 (88%)
Ureaplasma parvum serovar 3
A0A356NAZ7
82.2 %
80
71 (50%)
01 (83%)
Clostridiales bacterium
A0A3B8VB67
82.2 %
80
71 (55%)
01 (83%)
Clostridiales bacterium
A0A7K3ZD35
79.1 %
80
71 (52%)
01 (82%)
Crenarchaeota archaeon
A0A246EH72
75.4 %
82
71 (55%)
01 (71%)
Fusobacterium nucleatum subsp
A0A2C6C218
73.6 %
82
71 (63%)
31 (81%)
Fusobacterium nucleatum subsp
A0A3C0W9T3
70.7 %
78
71 (48%)
01 (91%)
Oscillospiraceae bacterium
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