Status Status Details Main knot Main knot (knot pull) Project name Input data Model lengths Last status changed Job submitted Key What to compute? Closure Number of random closures Accuracy Trajectory (Knot Pull) Search Identical
FINISHED 2025-01-27 23:45:30: AF-A0A4R1MXB5-F1 - main chain unknotted ... 83 (58%) 80(A)[-8(+), -14(-), -12(-), -2(+), -16(+), -6(-), -4(-), -10(+)](A) Recomputed from: A0A4R1MXB5-F1-AFv4 AF-A0A4R1MXB5-F1.cif
2025-01-28 00:18:16 2025-01-27 23:44:35 a47facba3efc4e Full matrix always close by statistical methods 100 Detailed Yes Yes: Identity: 70%

Results for job AF-A0A4R1MXB5-F1


Topology type: KNOTTED

Information
Main knot 83 (58%)
Knot fingerprint K 83 61 61 41 41 41
Global pLDDT 90.1

Artifact check
Topological complexity Knot with a high (8) number of crossings
pLDDT Knot-core Very high (90.1); 95.6% has >70 pLDDT; 0.0% has <50 pLDDT
pLDDT N-end knot-core border Very high (91.5); 100.0% has >70 pLDDT; 0.0% has <50 pLDDT
pLDDT C-end knot-core border Very high (91.7); 100.0% has >70 pLDDT; 0.0% has <50 pLDDT
C-alpha clashes No clashes
Knot map

Knot cutoff: 30 %


Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Slipknot tails Slipknot loops Main knot
None 16-450 434 1-15, 451-457 15 7 Knot
89.8 36-413 377 1-35, 414-457 35 44 Knot
89.7 92-432 340 1-91, 433-457 91 25 1-42,447-457 43-91,433-446 Slipknot
Model Sequence
MNLNKAKKQLEKGENISESLEIIVDNQKTLYYNYALVNFAFEYIVLGTKIDDYLTNKESEWIILKIKDITERVVLDKNIDESLLKEIDSLRKNISKKLEVLTTYVDELEIYEYIVNRQENNQDFISNEEVFAKEIVSFVFASKDNVTINQKLKEVLEQLPMRLTKAKFFDYIQDSLTLYKGTPEDKLIDLLSILEKIYSPEKNEGYGEEFEDIYALVNKIKSKVSKNMEDQTIAEVKEDFLYVSTVLKENVDRYLDAIKVTNLLYTMMVCFGKNIEPNANAIKIIKEVQEKWHENNEDIIENLINELGQLEGVQEDLNFTIQKNESSIDLAVNDYYAVYKNTLIEKDINNVKTAQSLTSSSFFVDLEESNEPSNVLDDKKIYELVNAFLNQIEIEMKKDDMIIRRAKMSKIIATLPTFFKEAEAIYEYIAFAFNQCRDQREKTASISLIKELMEDYE
Knot Pull Trajectory
Identical Structures in AlphaKnot
Structure ID Identity Length AF4 Model Topology ESM Model Topology Organism Link
A0A4R1MXB5
92.3 %
457
83 (44%)
N/A
Natranaerovirga hydrolytica