| Protein name |
rRNA methyltransferase
|
| Main knot |
31 (79%)
|
| Global pLDDT |
93.25
|
| Species |
Aquimarina atlantica
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A023BN35
|
| PDB structures |
-
|
| Model length |
269
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
93.8 | 196-237 | 42 | 1-195, 238-269 | 195 | 32 |
|
Model Sequence |
MQNQIKSLQNDKIKFLNQLKEKSRVRKREKRFIIEGKREITLAIQGSYTITQLYYCSSIIPFTEISALLSPSQHQVELFEITLEIYQKLAYRTTTEGVLAVAISKDNDIKNFTLSSKNPLILVAESPEKPGNIGALLRTADAAQLDAVFIANPKTDIYNPNIIRSSVGCIFTNNIATGSSAAIIDFLKKYNINIYGAALQKSVDYHTQDYTRPTAIVVGTEATGLSDVFLESTTQNIKIPMSGVIDSMNVSVAAGILIFEAKRQRGFTG
|
| Protein name |
rRNA methyltransferase
|
| Main knot |
31 (79%)
|
| Global pLDDT |
95.96
|
| Species |
Aquimarina atlantica
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
269
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
97.7 | 35-119 | 85 | 1-34, 120-269 | 34 | 150 |
|
Model Sequence |
MQNQIKSLQNDKIKFLNQLKEKSRVRKREKRFIIEGKREITLAIQGSYTITQLYYCSSIIPFTEISALLSPSQHQVELFEITLEIYQKLAYRTTTEGVLAVAISKDNDIKNFTLSSKNPLILVAESPEKPGNIGALLRTADAAQLDAVFIANPKTDIYNPNIIRSSVGCIFTNNIATGSSAAIIDFLKKYNINIYGAALQKSVDYHTQDYTRPTAIVVGTEATGLSDVFLESTTQNIKIPMSGVIDSMNVSVAAGILIFEAKRQRGFTG
|
A0A023BN35
IPR001537