A0A074J4J0F1

Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (72%)
Global pLDDT
93.36
Species
Thioclava pacifica
UniProt
Structure Prediction Model
AlphaFold v4:  A0A074J4J0
PDB structures
-
Model length
228
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
88.2 151-201 51 1-150, 202-228 150 27
Model Sequence
MGAGQAVPLTQDEAHYLFAVMRLEVGARVALFNGRDGEWTAEVVEAHKKRGVLACVEQAAPQLAPPDLWLIFAPIKKERTDFIVEKATELGCAKVLPVQTEFTNSARIRQDRLQAHAKEAAEQCLGTYVPPVEDLEPLKKLLASWDPARRILWADEALVGPAETLAGLAPGPWAILIGPEGGFSEGERETLRSLDFVTPVSLGPRILRADTAVCAAITLWQSALGDWR
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (75%)
Global pLDDT
93.07
Species
Thioclava pacifica
UniProt
Structure Prediction Model
PDB structures
-
Model length
228
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
96.8 151-200 50 1-150, 201-228 150 28
Model Sequence
MGAGQAVPLTQDEAHYLFAVMRLEVGARVALFNGRDGEWTAEVVEAHKKRGVLACVEQAAPQLAPPDLWLIFAPIKKERTDFIVEKATELGCAKVLPVQTEFTNSARIRQDRLQAHAKEAAEQCLGTYVPPVEDLEPLKKLLASWDPARRILWADEALVGPAETLAGLAPGPWAILIGPEGGFSEGERETLRSLDFVTPVSLGPRILRADTAVCAAITLWQSALGDWR
Comments
Domain Bacteria
Family Rhodobacteraceae
Species (Full Name) Thioclava pacifica DSM 10166
Gene TP2_14795
PFAM codes  PF04452
InterPro codes  IPR006700,  IPR015947,  IPR029026,  IPR029028,  IPR046886,  IPR046887
PDB structures (whole Protein) -
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