A0A077Z209F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (75%)
Global pLDDT
86.34
Species
Whipworm
UniProt
Structure Prediction Model
AlphaFold v4:  A0A077Z209
PDB structures
-
Model length
258
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.9 17-217 201 1-16, 218-258 16 41
Model Sequence
MPAVGTSADSSKEDCWPPLESNPQVFNRLIWKLANNQFLECYDIVSFDPQDLTYLPSEVVAVLLLFPVTEKYEKTCCEMQACSLAGQSEFPKDLFFVKQTVKNACGMVALLHALGNNPSLLRHPSFVADFLKISKDSTPEQRGALMASSAELITLQSFAAKLGQSRVIYWVFNLAYPSAFPLQAIDAQEDVFHHFVCFVKGSDGKLYELDGRKTSPLCHGPTAKSTFLSDALEQCRQFPQRCGEDVNYNAIAICAMAE
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (72%)
Global pLDDT
86.33
Species
Whipworm
UniProt
Structure Prediction Model
PDB structures
-
Model length
258
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
84.6 21-253 233 1-20, 254-258 20 5
Model Sequence
MPAVGTSADSSKEDCWPPLESNPQVFNRLIWKLANNQFLECYDIVSFDPQDLTYLPSEVVAVLLLFPVTEKYEKTCCEMQACSLAGQSEFPKDLFFVKQTVKNACGMVALLHALGNNPSLLRHPSFVADFLKISKDSTPEQRGALMASSAELITLQSFAAKLGQSRVIYWVFNLAYPSAFPLQAIDAQEDVFHHFVCFVKGSDGKLYELDGRKTSPLCHGPTAKSTFLSDALEQCRQFPQRCGEDVNYNAIAICAMAE
Comments
Domain Eukaryota
Family Trichuridae
Species (Full Name) Trichuris trichiura (Whipworm) (Trichocephalus trichiurus)
Gene TTRE_0000198301
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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