| Protein name |
Signal peptide protein
|
| Main knot |
51 (91%)
|
| Global pLDDT |
86.13
|
| Species |
Pseudomonas acidovorans
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A080NR20
|
| PDB structures |
-
|
| Model length |
108
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
95.2 | 41-98 | 58 | 1-40, 99-108 | 40 | 10 |
|
Model Sequence |
MPLLPRFSLVLACLALPAFVHAADFDKKNCTYKGIRLYGKVQIVHSFPDIKVQATSSFPDLKVKVVDSFADSCGEWKIVTSFPDFKVQMVSSFPDLKVDMGSSSPGVR
|
| Protein name |
Signal peptide protein
|
| Main knot |
01 (92%)
|
| Species |
Pseudomonas acidovorans
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
108
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MPLLPRFSLVLACLALPAFVHAADFDKKNCTYKGIRLYGKVQIVHSFPDIKVQATSSFPDLKVKVVDSFADSCGEWKIVTSFPDFKVQMVSSFPDLKVDMGSSSPGVR
|
| Domain |
Bacteria
|
| Family |
Comamonadaceae
|
| Species (Full Name) |
Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans)
|
| Gene |
SAMN05216519_1836
|
| PDB structures (whole Protein) |
-
|
A0A080NR20