A0A090NM00 | AlphaKnot 2.0

AF4

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Information

Protein name	Amino acid permease
Main knot	4₁ (72%)
Global pLDDT	83.48
Species	Shigella dysenteriae
UniProt	A0A090NM00
Structure Prediction Model	AlphaFold v4: A0A090NM00
PDB structures	-
Model length	288
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.7	51-275	225	1-50, 276-288	50	13

Model Sequence

MISGRHDRKPYYAGEAAIMAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRW

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (72%)
Global pLDDT	89.8
Species	Shigella dysenteriae
UniProt	A0A090NM00
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	288
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					76.0	51-275	225	1-50, 276-288	50	13

Model Sequence

Comments

Domain	Bacteria
Family	Enterobacteriaceae
Species (Full Name)	Shigella dysenteriae WRSd3
Gene	WRSd3_00602
PFAM codes	PF00324
InterPro codes	IPR004841
PDB structures (whole Protein)	-

A0A090NM00F1

AF4

Model Sequence

ESM1

Model Sequence