A0A093RYD7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (98%)
Global pLDDT	77.81
Species	golden-collared manakin
UniProt	A0A093RYD7
Structure Prediction Model	AlphaFold v4: A0A093RYD7
PDB structures	-
Model length	301
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.0	183-229	47	1-182, 230-301	182	72

Model Sequence

ENTLFPEVPDVEGKVKSNDSPVERQEAGLEKEECSEPMSKRQRKKLLKQKQWEEQKDLRRQKRKEKRQKRKLERQSKLDSSNEGNDRKCMRREVVPSTLRLIVDCSFDDLMVLKDVKKLHKQIQRCYAENRKAFHPVQFYLTSHGGQLKSNMNENDKGWVNWKDIQIRTEHYSELIKKEDLVYLTSDSPDVLKELDEKKAYVIGGLVDHNHHKGITYKKAVEQGIGHAQLPLRNFVKMNSRKVLAVNHVFEIILAYLEKRDWKEAFFSVLPQRKGAVPLGEANDSSKHALSGKEDEDNDSD

Comments

ESM1

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (89%)
Global pLDDT	89.19
Species	golden-collared manakin
UniProt	A0A093RYD7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	301
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					77.6	183-229	47	1-182, 230-301	182	72

Model Sequence

Comments

Domain	Eukaryota
Family	Pipridae
Species (Full Name)	Manacus vitellinus (golden-collared manakin)
Gene	N305_00598
PFAM codes	PF01746
InterPro codes	IPR007356, IPR016009, IPR016653, IPR028564, IPR038459
PDB structures (whole Protein)	-

A0A093RYD7F1

AF4

Model Sequence

ESM1

Model Sequence