A0A093XHP8 | AlphaKnot 2.0

AF4

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Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (82%)
Global pLDDT	82.72
Species	Pseudogymnoascus sp
UniProt	A0A093XHP8
Structure Prediction Model	AlphaFold v4: A0A093XHP8
PDB structures	-
Model length	338
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.2	26-247	222	1-25, 248-338	25	91

Model Sequence

MDRGSKRQQAFEAAETEADKMSGGWNTIESDAGVFTFLLDNLGVTGVQFEELISLDPTALLSLSPVYGVIFLFKYPTTALPSEPSGTPLPAAAESLFFAKQTIQNACGTQALLSVLLNVDTAAPSGEGVALGKELEGFKEFTSQFPPEFRGEALSNSDRIREVHNSFAKSSPFSMEEQQRAAGDDDELYHFIAYTPIDGILYELDGLQEAPISHGPCKFEEFPEKVVPVLQDRIGRYPATEIRFNLLAMVRDLRIRARETGDEGLLVQEEGKRQGWMFENALRRHNFVGFGAEMLKAVMREKIKEGKYEEWVEGAKKAYKGRVDERRRGGDGDEEMAG

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (82%)
Global pLDDT	85.08
Species	Pseudogymnoascus sp
UniProt	A0A093XHP8
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	338
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					72.0	27-247	221	1-26, 248-338	26	91

Model Sequence

Comments

Domain	Eukaryota
Family	Pseudeurotiaceae
Species (Full Name)	Pseudogymnoascus sp. VKM F-3557
Gene	V490_05521
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR017390, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

A0A093XHP8F1

AF4

Model Sequence

ESM1

Model Sequence