A0A094QL44 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	SpoU_sub_bind domain-containing protein
Main knot	3₁ (89%)
Global pLDDT	81.91
Species	freshwater metagenome
UniProt	A0A094QL44
Structure Prediction Model	AlphaFold v4: A0A094QL44
PDB structures	-
Model length	327
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.4	251-294	44	1-250, 295-327	250	33

Model Sequence

MAPRKPAKSSSPKVNTGKPGRAPGGRDTGSGKGGGKPPSTGRMSGSSSRSSGPREGGPRGRPIRQSDARRSAPVAKGLGGEQIEGRQAVRELLIGQRRKVKEIWIAQDIDPAPIIDDIEQLADAARVTVLEVPRRTLEDTARSEAPQGIIAFAQPLEEADFNALMTKRNGVMPFLVAVDGVTDPGNLGALLRCCDGAGVTGVILPKHRAVHVTPTVAKTSAGAIEHVPMTLVPGLPVAITQMRDKGIWVVGLDDSSENTLFDIANFATDGICIVLGSEGTGLSRLVKERCDTVVSIPMLGQVSSLNVSAAAALATYEVTRARLASPA

Comments

ESM1

Categories voted by users:

Information

Protein name	SpoU_sub_bind domain-containing protein
Main knot	3₁ (87%)
Global pLDDT	89.54
Species	freshwater metagenome
UniProt	A0A094QL44
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	327
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					73.2	251-294	44	1-250, 295-327	250	33

Model Sequence

Comments

Domain	Unclassified
Family	ecological metagenomes
Species (Full Name)	freshwater metagenome
Gene	GM51_15420
PFAM codes	PF00588, PF08032
InterPro codes	IPR001537, IPR004441, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A094QL44F1

AF4

Model Sequence

ESM1

Model Sequence