A0A0A2U1Z5 | AlphaKnot 2.0

AF4

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Information

Protein name	Transcriptional regulator
Main knot	8₁ (63%)
Global pLDDT	87.47
Species	Paenibacillus sp
UniProt	A0A0A2U1Z5
Structure Prediction Model	AlphaFold v4: A0A0A2U1Z5
PDB structures	-
Model length	279
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.1	26-244	219	1-25, 245-279	25	35

Model Sequence

MSIDKISHFVQSPHYEEMFFSGAKVNILRQLISEYQASLGLQRLEWAERNVVGKFIATKHYDLNNDQLYELLDSHGVLPKTVRIKWNSLNELEQHSLQENCLASKPYLKFTPKRINQEERDGGHISYRNDLVNYGIDGLLANWKQQKWIYSRLFDQWNALRVSALTEMLKTKQITISLSEGKLSVVIPDPCVDTNAAFQWGGTELLQRCGKIDMEQVKLLAAKGYYSMTEVQKHLKVVDVRTKYILLTLTSERNMMEGMIQQSNRYSWVNLRSQKGWEV

Comments

ESM1

Categories voted by users:

Information

Protein name	Transcriptional regulator
Main knot	8₁ (65%)
Global pLDDT	88.67
Species	Paenibacillus sp
UniProt	A0A0A2U1Z5
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	279
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.0	28-244	217	1-27, 245-279	27	35

Model Sequence

Comments

Domain	Bacteria
Family	Paenibacillaceae
Species (Full Name)	Paenibacillus sp. MAEPY2
Gene	P364_0113885
PDB structures (whole Protein)	-

A0A0A2U1Z5F1

AF4

Model Sequence

ESM1

Model Sequence