| Protein name |
Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransfera...
|
| Main knot |
31 (74%)
|
| Global pLDDT |
96.27
|
| Species |
Citrobacter freundii
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A0A5T1P4
|
| PDB structures |
-
|
| Model length |
155
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
97.8 | 71-120 | 50 | 1-70, 121-155 | 70 | 35 |
|
Model Sequence |
MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLATELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
|
| Protein name |
Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransfera...
|
| Main knot |
31 (71%)
|
| Global pLDDT |
85.06
|
| Species |
Citrobacter freundii
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
155
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
81.4 | 71-120 | 50 | 1-70, 121-155 | 70 | 35 |
|
Model Sequence |
MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLATELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
|
| Domain |
Bacteria
|
| Family |
Enterobacteriaceae
|
| Species (Full Name) |
Citrobacter freundii
|
| Gene |
rlmH AM363_10020 AN672_05490 B9P90_19315 BEH70_21920 C3433_03275 EOL15_09765 G5642_00880 HG694_10965 HMPREF3212_04738 HV077_09950 HV096_11875 HV169_08640 HV170_12880 HV173_06490 HV178_17265 HV183...
|
| PFAM codes |
PF02590
|
| InterPro codes |
 IPR003742, IPR029026, IPR029028
|
| PDB structures (whole Protein) |
-
|
A0A0A5T1P4