A0A0B7MCC5 | AlphaKnot 2.0

AF4

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Information

Protein name	Amino acid permease
Main knot	4₁ (54%)
Global pLDDT	83.82
Species	Syntrophaceticus schinkii
UniProt	A0A0B7MCC5
Structure Prediction Model	AlphaFold v4: A0A0B7MCC5
PDB structures	-
Model length	289
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.6	39-264	226	1-38, 265-289	38	25

Model Sequence

MSIEQRVNEEVYYGIIPTTRKDKMYNFWDILLATGAWAIATWCYVQGGYGATILGMKEVITNTFFGMTLAGLILCLAVIIPTRYGIDLWVYQKAVFGYRGMTLIAILAIASSFGYEAINAQLYANSITKIVEAAGIRVASGWSPWIASTCILFGMWIALRGPIAVKKATRIMVPSLMAVGVIIIILVFSNYSFAELAAIKPLNLADYPNRWEAYMIVMEWNIAFIFAWYAALGVLPRLVKTERESYWGHVGGFAMIMAIFICIGAITALAMVSPLTPNDGGRGFFSCFL

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (62%)
Global pLDDT	88.19
Species	Syntrophaceticus schinkii
UniProt	A0A0B7MCC5
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	289
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.3	39-264	226	1-38, 265-289	38	25

Model Sequence

Comments

Domain	Bacteria
Family	Thermoanaerobacterales Family III. Incertae Sedis
Species (Full Name)	Syntrophaceticus schinkii
Gene	SSCH_1540009
PDB structures (whole Protein)	-

A0A0B7MCC5F1

AF4

Model Sequence

ESM1

Model Sequence