A0A0B8NCM4 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Membrane protein
Main knot	5₂ (55%)
Global pLDDT	80.62
Species	Nocardia seriolae
UniProt	A0A0B8NCM4
Structure Prediction Model	AlphaFold v4: A0A0B8NCM4
PDB structures	-
Model length	366
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.2	21-277	257	1-20, 278-366	20	89

Model Sequence

MGGESVRLDGNTLVLPGGVGVRFIRTLRLPEEGTHPLPPGLGEFPVRRVADYADSVPEEWAKRGGVMLPMYLREAMWLSFSAPEPAALQIGVGKVCAVSGKPWSDRLAADPQNYVVLPRQPWLDGINSGKGIIRQFVAVPLGLGATVEGQVTGEETHGGIQLQNFALNDTELARWRRAEEARRRADAERVRAITTSAPLPASPMSYSAPHSIPLGAPPPAPGSTPPRPQPGAAPRARRKANAMGLGVGGTMRQEIYKDDRPLHDWSLHPSGRIFVHLVTPPDWHHITGEAAPPSPVDRKAYTAAGLPWFDYFDSDATDLAPADSLATVAPVGDWLGDDHEPWENPTPGQIHHLGDKQGKPVEDGDW

Comments

ESM1

Categories voted by users:

Information

Protein name	Membrane protein
Main knot	5₂ (65%)
Global pLDDT	74.2
Species	Nocardia seriolae
UniProt	A0A0B8NCM4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	366
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.3	22-289	268	1-21, 290-366	21	77

Model Sequence

Comments

Domain	Bacteria
Family	Nocardiaceae
Species (Full Name)	Nocardia seriolae
Gene	NS07_v2contig00030-0053 NS506_02028
PDB structures (whole Protein)	-

A0A0B8NCM4F1

AF4

Model Sequence

ESM1

Model Sequence