A0A0B9ASE6 | AlphaKnot 2.0

AF4

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Information

Protein name	Sodium/calcium exchanger membrane region
Main knot	3₁ (76%)
Global pLDDT	85.82
Species	Brevibacterium linens
UniProt	A0A0B9ASE6
Structure Prediction Model	AlphaFold v4: A0A0B9ASE6
PDB structures	-
Model length	398
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					82.8	72-322	251	1-71, 323-398	71	76

Model Sequence

MTAALRTIITPTAILRLVLGWGVFIALQFTSSLLAPPAPMPLLVTALVVIIAVILICAFGVVTEAEHLGNRLGDPYGSLVLTISICLIEVILIAAVLLGPGDHATIARDSVMAVSMIILNAVIGLCLLVGGLRHGALTHNRTGVSNYLVMIVVFAALAFAVPALIGTPDGAYESWQEIPIIVVTVGAYVFFLYRQMGPQAHEFTEAVPVGAAAASSSSNAGTSHPSPAEAAVEADDEPQGIVEILSTHRVEIILRLVLLVATVLPIVLLSHDMATLLDDGLGRLGAPVALSGVVIAMIVFLPETLTSLRAAWNGEIQRVSNLCHGAQVSTVGLTIPTVLVIGMLTDQQIVLAESPINLALFAITLLVSVIGFAGKKVTAVQGAAHIIIFVVFGLALFA

Comments

ESM1

Categories voted by users:

Information

Protein name	Sodium/calcium exchanger membrane region
Main knot	3₁ (69%)
Global pLDDT	89.82
Species	Brevibacterium linens
UniProt	A0A0B9ASE6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	398
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.4	72-322	251	1-71, 323-398	71	76

Model Sequence

Comments

Domain	Bacteria
Family	Brevibacteriaceae
Species (Full Name)	Brevibacterium linens
Gene	AE0388_0515
PFAM codes	PF01699
InterPro codes	IPR004837, IPR038377
PDB structures (whole Protein)	-

A0A0B9ASE6F1

AF4

Model Sequence

ESM1

Model Sequence