A0A0D2D681F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (56%)
Global pLDDT
93.93
Species
Cladophialophora immunda
UniProt
Structure Prediction Model
AlphaFold v4:  A0A0D2D681
PDB structures
-
Model length
244
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Knot map - computed using the Web Server in job: 9a5416f56fe555

Knot cutoff: 48%

2024-02-19T18:30:11.218323 image/svg+xml Matplotlib v3.6.1, https://matplotlib.org/

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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range Slipknot tails Slipknot loops Main Knot
None 8-239 232 1-7, 240-244 Knot
94.9 25-172 148 1-24, 173-244 Slipknot
Model Sequence
MSAQKTFIPLENNPRVMTKLAHRLGLSPALSFHDAYSLTDPDLVAFLPRPASALLFTYPVTTTAEAHYGKTNEAEADYDGSGPGEPVMFYHQTIHHACGLIGLLHCTTNGTAADFIQEGSDLEKLVKDTTPLKPAERAQFLHDSEMLEIAHAAAAQSGDSTAPPLGEDPGHAFIAFVKGKDGHLWELEGRRKGPVDRGMLEKDEDVLSDKALGLGPLPFLKREEAAGSGDVRFSCTVLAPSFDD
Knot Pull simplified model computed using the Web Server in job: 9a5416f56fe555
Processing file... [1197769/1197769]
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Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (53%)
Global pLDDT
91.63
Species
Cladophialophora immunda
UniProt
Structure Prediction Model
PDB structures
-
Model length
244
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range Slipknot tails Slipknot loops Main Knot
93.5 11-237 227 1-10, 238-244
Model Sequence
MSAQKTFIPLENNPRVMTKLAHRLGLSPALSFHDAYSLTDPDLVAFLPRPASALLFTYPVTTTAEAHYGKTNEAEADYDGSGPGEPVMFYHQTIHHACGLIGLLHCTTNGTAADFIQEGSDLEKLVKDTTPLKPAERAQFLHDSEMLEIAHAAAAQSGDSTAPPLGEDPGHAFIAFVKGKDGHLWELEGRRKGPVDRGMLEKDEDVLSDKALGLGPLPFLKREEAAGSGDVRFSCTVLAPSFDD
Comments
Domain Eukaryota
Family Herpotrichiellaceae
Species (Full Name) Cladophialophora immunda
Gene PV07_02880
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -

Identical Structures in AlphaKnot - computed using the Web Server in job: 9a5416f56fe555
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