A0A0D2XU94 | AlphaKnot 2.0

AF4

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Information

Protein name	Choline transport protein
Main knot	4₁ (83%)
Global pLDDT	75.01
Species	Fusarium vascular wilt of tomato
UniProt	A0A0D2XU94
Structure Prediction Model	AlphaFold v4: A0A0D2XU94
PDB structures	-
Structure in AlphaLasso	A0A0D2XU94: L₀
Model length	356
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.2	46-296	251	1-45, 297-356	45	60

Model Sequence

MEKATQMNQAERDALDLAALGHEQALTRKFSTLSMLSLAFCILGTWAVCAQSLATGIQNGGPVTCLWGLVLVTLCNVCIAMSLGEMCSSMPSALGQALWVGKLWKTSWGRFASYLTAFISVVGWWCLSASQIAFMAEFVLSMKLMFDPEWTGMNNGWVMFLVYTGINILFTFVNYVGCRSEKFLPWFNNFVAVGFVGLFIAFCLALPILVGTNSTLEYQSPKFVFGTWINETGWADGVVWFLGLVQSAYALTAYDSVLHMVEEIPAPRRNAPRTMVLAIVMGAISGFIFLVPACLHSRPCYDIGCTLWISFHRGCSECGWPQRRCGVDQNFSPLTGLVSPCVDPDFSFKTDMEFCS

Comments

ESM1

Categories voted by users:

Information

Protein name	Choline transport protein
Main knot	0₁ (80%)
Species	Fusarium vascular wilt of tomato
UniProt	A0A0D2XU94
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A0D2XU94: L₀
Model length	356
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Model Sequence

Comments

Domain	Eukaryota
Family	Nectriaceae
Species (Full Name)	Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) (Fusarium vascular wilt of tomato)
Gene	28949228 FOXG_07546
PFAM codes	PF13520
InterPro codes	IPR002293, IPR004840
PDB structures (whole Protein)	-

A0A0D2XU94F1

AF4

Model Sequence

ESM1

Model Sequence