A0A0D3LDU2 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Short-chain dehydrogenase/reductase SDR
Main knot	6₁ (57%)
Global pLDDT	92.8
Species	Flammeovirgaceae bacterium
UniProt	A0A0D3LDU2
Structure Prediction Model	AlphaFold v4: A0A0D3LDU2
PDB structures	-
Model length	307
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.5	74-281	208	1-73, 282-307	73	26

Model Sequence

MRDLQERKKLIERGMQLAATLPDITPDHASEEVKAIYNDIQNILRVPLVNQLFRTLANYPEYLEQLWQHFRPAFSSNSFELEADNLREKALMEALPEIDEAIWQELDIPEQLRDFQDTIYYVLPKLLLAASTFYEAASGSIPEPRSRRGEAPVSNTQIAAGIAAGTTSVALVDPKTERPELKKLFGDIKQQHGLSLLSSYYRGMANWPPFLEQAWLAIKPLVGNSEYENLKSFIVDQAQMSMRRLPIRQPELKEVDKEQQEEVIAVLAFFRYKFIPEMLLEAALIKALLDGPAEAYTSRFSVAVQED

Comments

ESM1

Categories voted by users:

Information

Protein name	Short-chain dehydrogenase/reductase SDR
Main knot	6₁ (46%)
Global pLDDT	82.77
Species	Flammeovirgaceae bacterium
UniProt	A0A0D3LDU2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	307
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.5	74-281	208	1-73, 282-307	73	26

Model Sequence

Comments

Domain	Bacteria
Family	Flammeovirgaceae
Species (Full Name)	Flammeovirgaceae bacterium 311
Gene	D770_09105
PFAM codes	PF10778
InterPro codes	IPR019714, IPR029032
PDB structures (whole Protein)	-

A0A0D3LDU2F1

AF4

Model Sequence

ESM1

Model Sequence