A0A0D5M8Z6F1

Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (81%)
Global pLDDT
92.93
Species
Halomonas sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A0D5M8Z6
PDB structures
-
Model length
258
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
90.5 185-231 47 1-184, 232-258 184 27
Model Sequence
MSKAVQASPAADWYSQHGKMPRLYVPAAFVAGSDVALPDGPARHITRVLRMGEGAPLVLFDGQGFEAGVRLVEVSRKQTLARVDAVWSGSGESPLSVHLGQAISKGDRMDYAIQKAVELGVAAITPLYTERGDVRLKGDREDKKHAHWQAVAASACEQSGRAVVPPVHPPMALQAWLAERREPLRLMLHLATGKAFDRQDRPAAVALLIGPEGGLSENDIAAAQTATFTPLTLGPRVLRTETAPIVALSLLQHYFGDL
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (80%)
Global pLDDT
95.47
Species
Halomonas sp
UniProt
Structure Prediction Model
PDB structures
-
Model length
258
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
98.4 186-233 48 1-185, 234-258 185 25
Model Sequence
MSKAVQASPAADWYSQHGKMPRLYVPAAFVAGSDVALPDGPARHITRVLRMGEGAPLVLFDGQGFEAGVRLVEVSRKQTLARVDAVWSGSGESPLSVHLGQAISKGDRMDYAIQKAVELGVAAITPLYTERGDVRLKGDREDKKHAHWQAVAASACEQSGRAVVPPVHPPMALQAWLAERREPLRLMLHLATGKAFDRQDRPAAVALLIGPEGGLSENDIAAAQTATFTPLTLGPRVLRTETAPIVALSLLQHYFGDL
Comments
Domain Bacteria
Family Halomonadaceae
Species (Full Name) Halomonas sp. KO116
Gene KO116_04264
PFAM codes  PF04452
InterPro codes  IPR006700,  IPR015947,  IPR029026,  IPR029028,  IPR046886,  IPR046887
PDB structures (whole Protein) -
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