A0A0D7EHL1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Histidine kinase
Main knot	4₁ (56%)
Global pLDDT	84.54
Species	Rhodopseudomonas palustris
UniProt	A0A0D7EHL1
Structure Prediction Model	AlphaFold v4: A0A0D7EHL1
PDB structures	-
Model length	308
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.7	49-297	249	1-48, 298-308	48	11

Model Sequence

MLHDWGVIAAALGYIGLLFGVASYGDRLSQLQRERAGVLIYPLSLAIYCTSWTFFGSVGFATRTSYDFLAIYIGPILMIVFGTPLLRRVIRLAKSQNITSIADFIAARYGKSQAVAATVAIIAIIGSVPYIALQLKAVASSLQTILGDDQAIAEIPIAGDIALIVALAMALFAVLFGTRQTNATEHQHGLMLAVATESIVKLVAFITAGVFVTFWMFSPSELIERAMKTPEAVRAIMYTPSSGNFLTMVVLSFCAIMLLPRQFHVSVVENSNDAEVGRARWLFPLYLVAINLFVIPIALAGLITFPFG

Comments

ESM1

Categories voted by users:

Information

Protein name	Histidine kinase
Main knot	4₁ (47%)
Global pLDDT	87.26
Species	Rhodopseudomonas palustris
UniProt	A0A0D7EHL1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	308
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.3	47-297	251	1-46, 298-308	46	11

Model Sequence

Comments

Domain	Bacteria
Family	Nitrobacteraceae
Species (Full Name)	Rhodopseudomonas palustris
Gene	OO17_21745
InterPro codes	IPR001734, IPR038377
PDB structures (whole Protein)	-

A0A0D7EHL1F1

AF4

Model Sequence

ESM1

Model Sequence