A0A0D8YCC1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	tRNA (Guanine-N(1)-)-methyltransferase
Main knot	3₁ (92%)
Global pLDDT	87.28
Species	Bovine lungworm
UniProt	A0A0D8YCC1
Structure Prediction Model	AlphaFold v4: A0A0D8YCC1
PDB structures	-
Model length	397
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.7	251-301	51	1-250, 302-397	250	96

Model Sequence

MKWLINLWLLSQWKFRRCFRLHGQSIAPIQWRNPLLTSYPSQELVNTLNNVQRKRLHTIVEETRTISMLTKHFPSEISAQNWIILLECHTRKQRLDYLKFLRSKELKRSKEKSKKLEKCVFQPEKRKERSEYPFYIPIRKMEKQERRIAWERVARAFRLGSPILVVDCRFLPLLSPRGAELTAIQLKYLISENRDDRTPWPLYFTNFDQTSERIRRLKERHLSGIESPTTCCPIVSPLSFSCLFPQEKIVYLSPDAQENLTSINEDYVYVLGGIVDRVTERNIPRQASLQTALYEQVRCKRLPLDEYIEWKSGSKFLTLTAVFSILRSVYSSGGDWKTALVRHIPVRNTRSSDEKSIAGRQFHDKIRRFDHQLLRILDDEIGKDSIECAVHISKHTS

Comments

ESM1

Categories voted by users:

Information

Protein name	tRNA (Guanine-N(1)-)-methyltransferase
Main knot	3₁ (91%)
Global pLDDT	78.64
Species	Bovine lungworm
UniProt	A0A0D8YCC1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	397
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					45.2	251-301	51	1-250, 302-397	250	96

Model Sequence

Comments

Domain	Eukaryota
Family	Dictyocaulidae
Species (Full Name)	Dictyocaulus viviparus (Bovine lungworm)
Gene	DICVIV_01539
PFAM codes	PF01746
InterPro codes	IPR007356, IPR016009, IPR028564, IPR038459
PDB structures (whole Protein)	-

A0A0D8YCC1F1

AF4

Model Sequence

ESM1

Model Sequence