A0A0F0CMQ6 | AlphaKnot 2.0

AF6

Categories voted by users:

Information

Protein name	PD-(D/E)XK nuclease family protein
Main knot	8₃ (42%)
Global pLDDT	87.68
Species	Clostridium sp
UniProt	A0A0F0CMQ6
Structure Prediction Model	AlphaFold v6: A0A0F0CMQ6
PDB structures	-
Model length	440
AlphaFold deposition date	2026-06-01
AlphaKnot deposition date	2026-07-09

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot

Model Sequence

MESRRIKRQLSAACNYSYTRLALNYYMYYETSLEDSLLGGRLAPLGTCFHALLKGFLDGNHDVDRLEELRNRVTCEMEAATAYTDVFQAYEYVLNRLEGRYAPQLLGAEAGAAHEDDMTQRIMDYITETDEAMTINERIRLVLGQLPVRMTKHKFFSLVEEGMSVYKGGSREGLKDMIYILRSEALLNTPKDMVTGYEQLHSILEEFKGADYKGMEPEQFRHLTQQMTDAGRILMEDTARLMLLMELVNDLYVLLISRDCAMMEVSEEQRLNAILSTVLSLFEEGKNQPIPETVTDSLPHLEGKQETYFEQWMQDGLCARELQEMKKQEGDAKKLYQVELLLSGSSFMSLNPSGPEADQTVDSAVLKGELDLLFEELARSFEGQPKVLVRAIMAKVLSCLPVFFESLDEVREYVKNSLVSCTDEMEKAVTMKLIGDMMEE

Comments

AF4

Categories voted by users:

Information

Protein name	PD-(D/E)XK nuclease family protein
Main knot	8₃ (42%)
Global pLDDT	88.11
Species	Clostridium sp
UniProt	A0A0F0CMQ6
Structure Prediction Model	AlphaFold v4: A0A0F0CMQ6
PDB structures	-
Model length	440
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.6	29-431	403	1-28, 432-440	28	9

Model Sequence

Comments

Domain	Bacteria
Family	Clostridiaceae
Species (Full Name)	Clostridium sp. FS41
Gene	CLFS41_04570
PDB structures (whole Protein)	-

A0A0F0CMQ6F1

AF6

Model Sequence

AF4

Model Sequence