A0A0F3RC36F1

Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) (16S rRNA m3U1498 methyltransferase)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) (16S rRNA m3U1498 methyltransferase)
Main knot
31 (68%)
Global pLDDT
78.61
Species
Rickettsia endosymbiont
UniProt
Structure Prediction Model
AlphaFold v4:  A0A0F3RC36
PDB structures
-
Model length
298
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
59.1 162-261 100 1-161, 262-298 161 37
Model Sequence
MKYNRIYINSRLAENSKIELAGDHVHYVKTVLRLKVNDGLRIFNGMDGEFLAQITDIGKHNLSVRLKEQLKKPYTESTLILAISIIKQDKLMLAINMATQLGITKIIPLITRRCQFRSVNIERLTKCVIEATEQSERLTPPIIEKAITIQDYLKKNNNLMLYANEHEKEENSILRILSSLSNIYSCEMKRGYTKNNLEKSKESVSRGAERILIREHLRTYKDDVANFSSSSSITIIVGPEGGFTNDELELLASYKNTKSISLGSNILRAETAAITAIAQVRLWCGSVSVVTPLLDHEV
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) (16S rRNA m3U1498 methyltransferase)
Main knot
31 (83%)
Global pLDDT
83.99
Species
Rickettsia endosymbiont
UniProt
Structure Prediction Model
PDB structures
-
Model length
298
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
95.8 160-260 101 1-159, 261-298 159 38
Model Sequence
MKYNRIYINSRLAENSKIELAGDHVHYVKTVLRLKVNDGLRIFNGMDGEFLAQITDIGKHNLSVRLKEQLKKPYTESTLILAISIIKQDKLMLAINMATQLGITKIIPLITRRCQFRSVNIERLTKCVIEATEQSERLTPPIIEKAITIQDYLKKNNNLMLYANEHEKEENSILRILSSLSNIYSCEMKRGYTKNNLEKSKESVSRGAERILIREHLRTYKDDVANFSSSSSITIIVGPEGGFTNDELELLASYKNTKSISLGSNILRAETAAITAIAQVRLWCGSVSVVTPLLDHEV
Comments
Domain Bacteria
Family Rickettsiaceae
Species (Full Name) Rickettsia endosymbiont of Ixodes pacificus
Gene REIP_1614
PFAM codes  PF04452
InterPro codes  IPR006700,  IPR015947,  IPR022438,  IPR029026,  IPR029028,  IPR046886,  IPR046887
PDB structures (whole Protein) -
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