A0A0F9AQ34 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Proline permease
Main knot	4₁ (61%)
Global pLDDT	91.86
Species	marine sediment
UniProt	A0A0F9AQ34
Structure Prediction Model	AlphaFold v4: A0A0F9AQ34
PDB structures	-
Model length	301
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.8	51-287	237	1-50, 288-301	50	14

Model Sequence

MKLLEISTFVIYFTAIIFLALFTSKKQKSDTSFVLGNRSLNFWLTALSAHASDMSSWLFMAYPMLIFTTGLFNIWAAIGLTFCMFLNWQFIAPKIRSATEKMNNLTMFSYFESRVKDGSGIIKTISALLSFVFYIIYITSGLVAMGLLVESLFGLSYTMGISIGLLIVVFYVFLGGYTTVAWIDLFQGFFLLGVILYIPVILIGKIGGFAPVMQAIKLQNLSTSLFPSFSTKTFLEIIFIALGWGLGYLGQPHIITKFMGIKNVLDMPKAKWVGISWQALALCGATLLGIIGIYIFPNGLQ

Comments

ESM1

Categories voted by users:

Information

Protein name	Proline permease
Main knot	4₁ (63%)
Global pLDDT	91.75
Species	marine sediment
UniProt	A0A0F9AQ34
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	301
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.3	51-287	237	1-50, 288-301	50	14

Model Sequence

Comments

Domain	Unclassified
Family	ecological metagenomes
Species (Full Name)	marine sediment metagenome
Gene	LCGC14_2822190
PFAM codes	PF00474
InterPro codes	IPR001734, IPR038377
PDB structures (whole Protein)	-

A0A0F9AQ34F1

AF4

Model Sequence

ESM1

Model Sequence