A0A0F9S7V8 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Methionine adenosyltransferase (EC 2.5.1.6)
Main knot	3₁ (72%)
Global pLDDT	95.09
Species	marine sediment
UniProt	A0A0F9S7V8
Structure Prediction Model	AlphaFold v4: A0A0F9S7V8
PDB structures	-
Model length	394
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.4	14-270	257	1-13, 271-394	13	124

Model Sequence

MSRMNYTFTSESVSEGHPDKVCDRISDAVLDAFLTQEPEARVAAETFATTNRVVIGGEVGLSDKNKLSEYMGKIESIARACIKDIGYEQDKFHHATCEITNLLHGQSAHIAQGVDASGVKEEGAGDQGIMFGFATKETPELMPAPIHYAHAILRRLAEVRKNGTEPTLRPDAKSQLSVRYEDGKPVGVSSIVLSTQHAHENQTSADIRDIVEPYITEVLPEGWITKDTEWWVNPTGTFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYVARYLAKNVVAAGLAEKCTIQLSYAIGVSKPLSIYCDTFGGDADVADAAIEKAIGQIIDLTPRGIREHLQLNKPIYERTAAYGHFGRAPEADGGFSWEKTDLVDALKAAL

Comments

ESM1

Categories voted by users:

Information

Protein name	Methionine adenosyltransferase (EC 2.5.1.6)
Main knot	3₁ (76%)
Global pLDDT	84.31
Species	marine sediment
UniProt	A0A0F9S7V8
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	394
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.7	14-314	301	1-13, 315-394	13	80

Model Sequence

Comments

Domain	Unclassified
Family	ecological metagenomes
Species (Full Name)	marine sediment metagenome
Gene	LCGC14_0486250
PFAM codes	PF00438, PF02772, PF02773
InterPro codes	IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
PDB structures (whole Protein)	-

A0A0F9S7V8F1

AF4

Model Sequence

ESM1

Model Sequence