A0A0F9ZBG4F1

Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (72%)
Global pLDDT
94.4
Species
Candidatus Peregrinibacteria
UniProt
Structure Prediction Model
AlphaFold v4:  A0A0F9ZBG4
PDB structures
-
Model length
238
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
93.0 165-215 51 1-164, 216-238 164 23
Model Sequence
MQRFFIEKNWIEERKIFITDKNLIHQLRNVLRIKDNEKIIFLDNNGFEYLCKIIKYEKNSVEAEIVEKKENSNEISNEIYIYQALPKQLSRFEFVLQKGTELGVRGFVPLVTQRCERREIKNRDRLKIIIKEAAEQCGRGILPELFDIVDFQKLLLNKPLGQNIIAYEGENIENSLSNLIKILNLNERINIFIGPEGGFEFSEIEKAVKSDFFRFSLGSLILRTETAGIAIASRLIFH
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (72%)
Global pLDDT
95.37
Species
Candidatus Peregrinibacteria
UniProt
Structure Prediction Model
PDB structures
-
Model length
238
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
97.6 165-215 51 1-164, 216-238 164 23
Model Sequence
MQRFFIEKNWIEERKIFITDKNLIHQLRNVLRIKDNEKIIFLDNNGFEYLCKIIKYEKNSVEAEIVEKKENSNEISNEIYIYQALPKQLSRFEFVLQKGTELGVRGFVPLVTQRCERREIKNRDRLKIIIKEAAEQCGRGILPELFDIVDFQKLLLNKPLGQNIIAYEGENIENSLSNLIKILNLNERINIFIGPEGGFEFSEIEKAVKSDFFRFSLGSLILRTETAGIAIASRLIFH
Comments
Domain Bacteria
Family unclassified Candidatus Peregrinibacteria
Species (Full Name) Candidatus Peregrinibacteria bacterium GW2011_GWC2_33_13
Gene UR30_C0001G0021
PFAM codes  PF04452
InterPro codes  IPR006700,  IPR015947,  IPR029026,  IPR029028,  IPR046886,  IPR046887
PDB structures (whole Protein) -
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