A0A0H2KSH2 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Primosomal protein N' (Replication factor Y)-superfamily II helicase
Main knot	3₁ (96%)
Global pLDDT	84.87
Species	Cellulosimicrobium funkei
UniProt	A0A0H2KSH2
Structure Prediction Model	AlphaFold v4: A0A0H2KSH2
PDB structures	-
Model length	397
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.6	151-342	192	1-150, 343-397	150	55

Model Sequence

MDRRGRGPRARAAVRGDAPAAAPDRRPGRSPDRSGGGLTVSDTQGELVRTRCDACGSQLAYAPGTQHLRCVACGGTVAIVHAPGDAVDEHSFDAWAAAQGGVRAGILDARLLTCDGCGATTQGTDLSVACRFCGGHLVAAAETDGLVQPEAVVPFGVEQAQARDAFRRWVRSRWFAPGELKKVGDTESLHGSYVPHWTFDARTSSAYSGQRGDAYYVTVKNGDEERQERRVSWTPVSGHVARDFDDVLVPATSQVAERDLSKLGPWPLSHAVPFRAEYLAGFAAARYDVEPPAGLDRAKQKMAPVIKDDVERDIGGDEQRVGSIRTAYADVMFKLVLLPLWIATYVYAGKQWQVMVNANTGQVIGRRPYSVGKIVLAVLAGLLVVAALVLWYLRSQT

Comments

ESM1

Categories voted by users:

Information

Protein name	Primosomal protein N' (Replication factor Y)-superfamily II helicase
Main knot	3₁ (88%)
Global pLDDT	87.77
Species	Cellulosimicrobium funkei
UniProt	A0A0H2KSH2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	397
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					61.7	151-342	192	1-150, 343-397	150	55

Model Sequence

Comments

Domain	Bacteria
Family	Promicromonosporaceae
Species (Full Name)	Cellulosimicrobium funkei
Gene	FB00_09945
PDB structures (whole Protein)	-

A0A0H2KSH2F1

AF4

Model Sequence

ESM1

Model Sequence