| Protein name |
Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransfera...
|
| Main knot |
31 (74%)
|
| Global pLDDT |
95.74
|
| Species |
Shigella sonnei
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A0I3MT74
|
| PDB structures |
-
|
| Model length |
155
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
97.3 | 71-121 | 51 | 1-70, 122-155 | 70 | 34 |
|
Model Sequence |
MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
|
| Protein name |
Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransfera...
|
| Main knot |
31 (74%)
|
| Global pLDDT |
85.08
|
| Species |
Shigella sonnei
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
155
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
81.4 | 71-120 | 50 | 1-70, 121-155 | 70 | 35 |
|
Model Sequence |
MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
|
| Domain |
Bacteria
|
| Family |
Enterobacteriaceae
|
| Species (Full Name) |
Shigella sonnei
|
| Gene |
rlmH BZ172_19090 CBL27_01560 CI633_07650 E3T85_12585 E3U27_01605 EKS37_25380 ERS009857_02020 ERS706451_02632 SAMEA1569760_01258 SAMEA2054241_03232 SAMEA3710766_01427
|
| PFAM codes |
PF02590
|
| InterPro codes |
 IPR003742, IPR029026, IPR029028
|
| PDB structures (whole Protein) |
-
|
A0A0I3MT74