A0A0J6SVE1 | AlphaKnot 2.0

AF4

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Information

Protein name	Amino acid transporter
Main knot	4₁ (62%)
Global pLDDT	87.6
Species	Methylobacterium tarhaniae
UniProt	A0A0J6SVE1
Structure Prediction Model	AlphaFold v4: A0A0J6SVE1
PDB structures	-
Model length	317
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.3	48-298	251	1-47, 299-317	47	19

Model Sequence

MARESGADGLMRTKPIDRLRQDAEGGSHSLERTLGPLSLVGLGIGAIIGAGLFSLTGIAAAENAGPAVVLSFAIAAIGCALAGMCYSELASMIPVSGSAYTYAYATMGEFVAWIIGWDLVLEYAVGAATVSVSWSKYVATLLQDWGITLPPRLLHSPFETVQFADGSTVHGLVNLPAVLILCLISLLLMRGVRESTRVNSVIVVVKVAVVLIVVGVGLFYVKAQNYVPFIPENTGTFGEYGWSGIMRAAGVVFFAYIGFDAVSTAAQEVKNPQRTMMIGILGSLAICTVLYIAFAAVLTGLVPYASMKGDAAPVATA

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid transporter
Main knot	4₁ (60%)
Global pLDDT	90.92
Species	Methylobacterium tarhaniae
UniProt	A0A0J6SVE1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	317
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					82.3	48-298	251	1-47, 299-317	47	19

Model Sequence

Comments

Domain	Bacteria
Family	Methylobacteriaceae
Species (Full Name)	Methylobacterium tarhaniae
Gene	VQ03_15890
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A0J6SVE1F1

AF4

Model Sequence

ESM1

Model Sequence