A0A0J8IRG3 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Heme utilization protein
Main knot	8₁₉ (80%)
Global pLDDT	70.78
Species	Pseudomonas fildesensis
UniProt	A0A0J8IRG3
Structure Prediction Model	AlphaFold v4: A0A0J8IRG3
PDB structures	-
Model length	249
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					76.3	43-236	194	1-42, 237-249	42	13

Model Sequence

MKPQMALKPMVFALAALMAAAAQANGWHPAPQPTGTVAAVVTDVQNSAGNKFDDTKTENNASSDNSVNGNSGNVGVNVQAGSGNQADNSAAISSAKGDFAAVFGVVDVNQNSALNNFVNKGTQNNASLDNSLNGNSGNLGYNGQAGQGNQGKNNLAITTADGKNIAAAANTEQNSLANSYLNAAATSHGYGYGYGGKSQIVSNNSSLDNSVNRNSGNVGVNLQSGSGNQGSNSLSIGQGCSVCSSAVRF

Comments

ESM1

Categories voted by users:

Information

Protein name	Heme utilization protein
Main knot	8₂₁ (82%)
Global pLDDT	67.11
Species	Pseudomonas fildesensis
UniProt	A0A0J8IRG3
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	249
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					52.8	55-221	167	1-54, 222-249	54	28

Model Sequence

Comments

Domain	Bacteria
Family	Pseudomonadaceae
Species (Full Name)	Pseudomonas fildesensis
Gene	ACR52_19200
PDB structures (whole Protein)	-

A0A0J8IRG3F1

AF4

Model Sequence

ESM1

Model Sequence