| Protein name |
Heme utilization protein
|
| Main knot |
819 (80%)
|
| Global pLDDT |
70.78
|
| Species |
Pseudomonas fildesensis
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A0J8IRG3
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A0J8IRG3: L0
|
| Model length |
249
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
76.3 | 43-236 | 194 | 1-42, 237-249 | 42 | 13 |
|
Model Sequence |
MKPQMALKPMVFALAALMAAAAQANGWHPAPQPTGTVAAVVTDVQNSAGNKFDDTKTENNASSDNSVNGNSGNVGVNVQAGSGNQADNSAAISSAKGDFAAVFGVVDVNQNSALNNFVNKGTQNNASLDNSLNGNSGNLGYNGQAGQGNQGKNNLAITTADGKNIAAAANTEQNSLANSYLNAAATSHGYGYGYGGKSQIVSNNSSLDNSVNRNSGNVGVNLQSGSGNQGSNSLSIGQGCSVCSSAVRF
|
| Protein name |
Heme utilization protein
|
| Main knot |
821 (82%)
|
| Global pLDDT |
67.11
|
| Species |
Pseudomonas fildesensis
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A0J8IRG3: L0
|
| Model length |
249
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
52.8 | 55-221 | 167 | 1-54, 222-249 | 54 | 28 |
|
Model Sequence |
MKPQMALKPMVFALAALMAAAAQANGWHPAPQPTGTVAAVVTDVQNSAGNKFDDTKTENNASSDNSVNGNSGNVGVNVQAGSGNQADNSAAISSAKGDFAAVFGVVDVNQNSALNNFVNKGTQNNASLDNSLNGNSGNLGYNGQAGQGNQGKNNLAITTADGKNIAAAANTEQNSLANSYLNAAATSHGYGYGYGGKSQIVSNNSSLDNSVNRNSGNVGVNLQSGSGNQGSNSLSIGQGCSVCSSAVRF
|
| Domain |
Bacteria
|
| Family |
Pseudomonadaceae
|
| Species (Full Name) |
Pseudomonas fildesensis
|
| Gene |
ACR52_19200
|
| PDB structures (whole Protein) |
-
|
A0A0J8IRG3