A0A0J9X592 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (67%)
Global pLDDT	85.2
Species	Oospora lactis
UniProt	A0A0J9X592
Structure Prediction Model	AlphaFold v4: A0A0J9X592
PDB structures	-
Model length	346
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.1	6-256	251	1-5, 257-346	5	90

Model Sequence

MSSGWNTIESDAGVFTELIEKLNVKGLQFHEFLSIDPETLSEVQPLYGLIFLFKYRGSEIRQRRVRQQTASAGAVFGPDVPGAHYDEVSASIPISEQPDKGVFFAHQTIQDACATQAVLSLLLNFPPGQEDVDVGPVIKNFGEFVESFDPELRGEAISNSEEIRAVHNSFSRPNPFVDEDQNDTERDENNDGLYHFVAYLPIHGKLYELDGLHPYPIVHDVGGAEVTLESFPALVSKVLMERVANSPAGEMRFALLGLTKDPRPMLRAIGDTDGLEREESKRAAWSHENALRRENYIGLINALVRSVSGKLTDAEWQSQVIEAGRSRSQARIERIKAQKERNFPEH

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (70%)
Global pLDDT	85.08
Species	Oospora lactis
UniProt	A0A0J9X592
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	346
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.3	7-256	250	1-6, 257-346	6	90

Model Sequence

Comments

Domain	Eukaryota
Family	Dipodascaceae
Species (Full Name)	Geotrichum candidum (Oospora lactis) (Dipodascus geotrichum)
Gene	BN980_GECA02s03211g
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR017390, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

A0A0J9X592F1

AF4

Model Sequence

ESM1

Model Sequence