| Protein name |
tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
|
| Main knot |
31 (88%)
|
| Global pLDDT |
94.61
|
| Species |
Escherichia coli
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A0K4SH07
|
| PDB structures |
-
|
| Model length |
255
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
97.5 | 86-131 | 46 | 1-85, 132-255 | 85 | 124 |
|
Model Sequence |
MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPSVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEFKKEHAQQQHKHDGMA
|
| Protein name |
tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
|
| Main knot |
31 (83%)
|
| Global pLDDT |
91.12
|
| Species |
Escherichia coli
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
255
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
90.0 | 86-131 | 46 | 1-85, 132-255 | 85 | 124 |
|
Model Sequence |
MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPSVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEFKKEHAQQQHKHDGMA
|
| Domain |
Bacteria
|
| Family |
Enterobacteriaceae
|
| Species (Full Name) |
Escherichia coli
|
| Gene |
trmD A8X14_004157 AAG80_003008 BMO21_003095 BO178_003468 CX690_002508 CX691_004529 CX694_004516 CX696_003748 CYM75_004434 ERS085411_03455 F9U58_17910 F9V22_11905 FNA08_21165 GF199_14505 GF698_159...
|
| PFAM codes |
PF01746
|
| InterPro codes |
IPR002649, IPR016009, IPR023148, IPR029026, IPR029028
|
| PDB structures (whole Protein) |
-
|