A0A0L0HQ53 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (86%)
Global pLDDT	80.04
Species	strain DAOM BR117
UniProt	A0A0L0HQ53
Structure Prediction Model	AlphaFold v4: A0A0L0HQ53
PDB structures	-
Model length	388
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.5	51-277	227	1-50, 278-388	50	111

Model Sequence

MGLNGTHSEPTISNETSSKTEGHSNAGQDVGPPPNMLDVSVGDELEASPWAMIESDPGVFTELAAKIGIKGVVVEEMFGLGEECFEPLKPIYGLIFLFRWRDADTNESDVRGDIANDLFFMNQVVENACATQALVSIALNCDFLDIGEELSRFKTFTQDFTPAMRGLALTNSHLLRTAHNSFSRQTDLPVLDYPIPEIHKNPGSRKRKLSETDEDAPFHFISYVPVNGIVWELDGLKRAPKKLGEVPDGCNWIDVVQPAIRKRMERYENDAVEFSLMAVIKDRIETLRELQEDCARSLSAVRERLSHEESGLGIHPDTASSHLNELRDTMTKLESQQRATQRDLEDEIAKREKYHAENVRRRFNYGPFIRKYIEIVHRSGFLEDLLIA

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (81%)
Global pLDDT	85.51
Species	strain DAOM BR117
UniProt	A0A0L0HQ53
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	388
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					64.3	51-277	227	1-50, 278-388	50	111

Model Sequence

Comments

Domain	Eukaryota
Family	Spizellomycetaceae
Species (Full Name)	Spizellomyces punctatus (strain DAOM BR117)
Gene	SPPG_02018
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

A0A0L0HQ53F1

AF4

Model Sequence

ESM1

Model Sequence