A0A0L8F087F1

FeMo cofactor biosynthesis protein NifB (Nitrogenase cofactor maturase NifB) (Radical SAM assemblase NifB)
AF4
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Information
Protein name
FeMo cofactor biosynthesis protein NifB (Nitrogenase cofactor maturase NifB) (Radical SAM assemblase NifB)
Main knot
41 (42%)
Global pLDDT
90.49
Species
Clostridium sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A0L8F087
PDB structures
-
Model length
299
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.9 33-299 267 1-32, 32 0
Model Sequence
MPGLNDIKNHDKFSKLSNIHPCMGGKAHMKFGRLHLPVSPTCNIQCKFCKRDYNNNDEDRPGVANGILDPKDAVKTVKKALELCPDITVVGIAGPGDTLATRNAIETFKLVHEAYPELIECLSTNGLLLEKYADELYEAGVSTITVTVNAVDPKIQSQIISYIELDGKKYYGEAAASILIAAQLRGIKKISDLGIVVKVNTVLVPGINDKHIEETAKTVKEAGATLYNIIPLIPQYELKEVPAPTCLELDSARAKAEKYLEVFRHCKHCRADACGIPGQRDLSKELYGTLSDIETFSHG
Comments
ESM1
Categories voted by users:
Information
Protein name
FeMo cofactor biosynthesis protein NifB (Nitrogenase cofactor maturase NifB) (Radical SAM assemblase NifB)
Main knot
01 (72%)
Species
Clostridium sp
UniProt
Structure Prediction Model
PDB structures
-
Model length
299
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Model Sequence
MPGLNDIKNHDKFSKLSNIHPCMGGKAHMKFGRLHLPVSPTCNIQCKFCKRDYNNNDEDRPGVANGILDPKDAVKTVKKALELCPDITVVGIAGPGDTLATRNAIETFKLVHEAYPELIECLSTNGLLLEKYADELYEAGVSTITVTVNAVDPKIQSQIISYIELDGKKYYGEAAASILIAAQLRGIKKISDLGIVVKVNTVLVPGINDKHIEETAKTVKEAGATLYNIIPLIPQYELKEVPAPTCLELDSARAKAEKYLEVFRHCKHCRADACGIPGQRDLSKELYGTLSDIETFSHG
Comments
Domain Bacteria
Family Clostridiaceae
Species (Full Name) Clostridium sp. DMHC 10
Gene AGR56_10405
PFAM codes  PF04055
InterPro codes  IPR000385,  IPR005980,  IPR006638,  IPR007197,  IPR013785
PDB structures (whole Protein) -
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