A0A0M2GYH6 | AlphaKnot 2.0

AF4

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Information

Protein name	Membrane protein
Main knot	5₂ (43%)
Global pLDDT	81.76
Species	Streptomyces variegatus
UniProt	A0A0M2GYH6
Structure Prediction Model	AlphaFold v4: A0A0M2GYH6
PDB structures	-
Model length	369
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					82.2	22-281	260	1-21, 282-369	21	88

Model Sequence

MADTTVRIDGNTLRLPGGVAVRFIRTLRLPETGTHPLPPGLGEFPVRRIADYGDRVPEAWRARGGVMLPVYLREAMWLSFAGTSEPAALQVGVGKVCAVSGRPWSDRLAHGPQNYVVLPRQPWLDGINSGTGTVRQFVAVPLGLGATVEGQVTGEEVWGGVQLRSFALNGRELARWHEEERQRAERTRAMAPPSGYGAAMPGGLPPAASGGFGAAMPMAAPSAPGAVPAPAAGAAPASPPRAAAAMGLGVGGSMRQEVYQDDRPLTDWSEQPAGRVFVHLVTPPEWRRITGEAAPPSPVDRAAYTRAGLPWFDYCDEDAPDLAPTDTLRSVKPVGDWLGDDHEPWQPPTPGQTQQLKDAPGKPIEDGDW

Comments

ESM1

Categories voted by users:

Information

Protein name	Membrane protein
Main knot	5₂ (73%)
Global pLDDT	73.77
Species	Streptomyces variegatus
UniProt	A0A0M2GYH6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	369
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.3	23-296	274	1-22, 297-369	22	73

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces variegatus
Gene	UK15_06010
PDB structures (whole Protein)	-

A0A0M2GYH6F1

AF4

Model Sequence

ESM1

Model Sequence