A0A0M2NHD4 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Lipoprotein
Main knot	4₁ (68%)
Global pLDDT	84.97
Species	Christensenella hongkongensis
UniProt	A0A0M2NHD4
Structure Prediction Model	AlphaFold v4: A0A0M2NHD4
PDB structures	-
Model length	374
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.0	51-365	315	1-50, 366-374	50	9

Model Sequence

MGKRNRHILIITILIVSFILVVAACSNSNIVPINTINKTAEAMAPDKETYPITKVEKKIFTDEQILSYVQQFTNSTEMYSDWGAIGDLTKDTSTVSSTSQLILSELESGVYHDAYIKQADGSIAQCTFARNHNNFAYRKNMNLEVYPQSLIDEDMATYMPKSPSISKQSAHEQALEYANDIGANDLSLFTEEACTIVLDGEIDSYGWIFTFTRNIDGLQKIYYPSSYYLNPNVPPDYGSPWEPEFLRIAINEEGLCLLWYEGACKITNEENMSAKIEDVDTMEAQAIDTLQKIFASSSTDEEALDINITKFELGIDLLSSEKKADQGEYIPTWTVNFDYGYPDSTFKSQSSIVLNAIDGSYIEPRVTNQYLAGI

Comments

ESM1

Categories voted by users:

Information

Protein name	Lipoprotein
Main knot	4₁ (64%)
Global pLDDT	77.65
Species	Christensenella hongkongensis
UniProt	A0A0M2NHD4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	374
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					73.9	51-365	315	1-50, 366-374	50	9

Model Sequence

Comments

Domain	Bacteria
Family	Christensenellaceae
Species (Full Name)	Christensenella hongkongensis
Gene	CHK_0951
PFAM codes	PF19499
InterPro codes	IPR046098
PDB structures (whole Protein)	-

A0A0M2NHD4F1

AF4

Model Sequence

ESM1

Model Sequence