A0A0M5IPU9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Membrane protein
Main knot	5₂ (57%)
Global pLDDT	83.21
Species	Streptomyces pristinaespiralis
UniProt	A0A0M5IPU9
Structure Prediction Model	AlphaFold v4: A0A0M5IPU9
PDB structures	-
Model length	356
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.6	23-281	259	1-22, 282-356	22	75

Model Sequence

MAASAVRVDGNSLLLGGGVRVRFIRTLRLPESGTHQLPPGLGEFPVRRVEDHLGTVPRQMRERGGVMLPVYLREAMWLSFAGSSEPAALQVGVGKVCAVSGKKWRGTLTRKPQNYVVLPRQPWLDGINSGKGTVRQFVAVPLGLGATVEGQVTGEETWGGVQLQAFGLSGAALAAWREEERARAERAARAPAPAQPLAYGAPMPPPPAPAYGAPAAPAAPGGPPRARSAAMGLGVGGSMRQEVYRDERRLSDWADEPSGRVFVHLVTPPEWRRITGEEPPPSPVDRAAYTRAGLPWYEYYDEGAADLAPADTLSGVQPVGDWLGDDHDPWQPPAPGQVVPLGDAPAPGKPVADGDW

Comments

ESM1

Categories voted by users:

Information

Protein name	Membrane protein
Main knot	5₂ (67%)
Global pLDDT	74.49
Species	Streptomyces pristinaespiralis
UniProt	A0A0M5IPU9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	356
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.5	24-282	259	1-23, 283-356	23	74

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces pristinaespiralis
Gene	SPRI_6618
PDB structures (whole Protein)	-

A0A0M5IPU9F1

AF4

Model Sequence

ESM1

Model Sequence