A0A0M8X0Q7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Membrane protein
Main knot	5₂ (63%)
Global pLDDT	79.31
Species	Streptomyces sp
UniProt	A0A0M8X0Q7
Structure Prediction Model	AlphaFold v4: A0A0M8X0Q7
PDB structures	-
Model length	376
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					80.7	23-302	280	1-22, 303-376	22	74

Model Sequence

MTGGGVRIDGNTLRLPGGVAVRFVRTLRLPESGTHPLPPGLGEFPVRRVADHADRVPEQMRARGGVMLPVYLREAMWLSFAGTAEPAALQVGVGKVCAVSGEPWRDRLARRPQNYVVLPRQPWLDGINSGKGTVRQFVAVPLGLGATVEGQVTGEEVWGGVQLQSFPLKEGALAAWRRQERERERALPPVPPGGFGATGSYGPPGGFGAALPMAAPAPGGPPPGGAAGSPPAAASYGAPPPPAAAAPRRAAAMGLGVGGSMRQEVYQDDRPLGDWSEEPAGRVFVHLVTPPEWRRITGEAPPPSPVDRAAYTRAGLPWFDYYDADADDLAPTDALGGVEPVGEWLGADLDPWQAPSAGQVAPLKDAPGKPVEDGEW

Comments

ESM1

Categories voted by users:

Information

Protein name	Membrane protein
Main knot	5₂ (66%)
Global pLDDT	71.41
Species	Streptomyces sp
UniProt	A0A0M8X0Q7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	376
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.3	25-307	283	1-24, 308-376	24	69

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces sp. NRRL B-3648
Gene	ADL04_16335
PDB structures (whole Protein)	-

A0A0M8X0Q7F1

AF4

Model Sequence

ESM1

Model Sequence