| Protein name |
Type II CRISPR RNA-guided endonuclease Cas9
|
| Main knot |
81 (62%)
|
| Global pLDDT |
87.95
|
| Species |
Paenibacillus xylanivorans
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A0M9BPY4
|
| PDB structures |
-
|
| Model length |
279
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
90.7 | 26-244 | 219 | 1-25, 245-279 | 25 | 35 |
|
Model Sequence |
MSIEKIIHFVQSSNYEQMHSSGAKVQLLRQAIGEYQSSLGLQRLEWTKQNVVGKFIATKEYDLKNQQLFDLLDNHGVLSKVVRIKLNKLNESEKLSLQEFRTAGNQYLRFSPIRANSGSREEEFCAYRKNITNNNIYWLLDQWKHHKRIYSSFVKQWESIRNLAFKGMLRMNQHKVTLPVGKLSVVIPDPNIDADAAYRMGGKQLLQRSGKIDMEQVKLYAARGYFSLSQVYELLHLQNIETKYLLLTLTSERNMMEGLVQQNNRHSWINLQSEVAWEF
|
| Protein name |
Type II CRISPR RNA-guided endonuclease Cas9
|
| Main knot |
81 (61%)
|
| Global pLDDT |
87.38
|
| Species |
Paenibacillus xylanivorans
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
279
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
90.4 | 28-244 | 217 | 1-27, 245-279 | 27 | 35 |
|
Model Sequence |
MSIEKIIHFVQSSNYEQMHSSGAKVQLLRQAIGEYQSSLGLQRLEWTKQNVVGKFIATKEYDLKNQQLFDLLDNHGVLSKVVRIKLNKLNESEKLSLQEFRTAGNQYLRFSPIRANSGSREEEFCAYRKNITNNNIYWLLDQWKHHKRIYSSFVKQWESIRNLAFKGMLRMNQHKVTLPVGKLSVVIPDPNIDADAAYRMGGKQLLQRSGKIDMEQVKLYAARGYFSLSQVYELLHLQNIETKYLLLTLTSERNMMEGLVQQNNRHSWINLQSEVAWEF
|
| Domain |
Bacteria
|
| Family |
Paenibacillaceae
|
| Species (Full Name) |
Paenibacillus xylanivorans
|
| Gene |
AMS66_09910
|
| PDB structures (whole Protein) |
-
|
A0A0M9BPY4