| Protein name |
RTX toxin
|
| Main knot |
819 (94%)
|
| Global pLDDT |
73.4
|
| Species |
Ruegeria denitrificans
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A0P1ICW0
|
| PDB structures |
-
|
| Model length |
661
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
88.0 | 308-591 | 284 | 1-307, 592-661 | 307 | 70 |
|
Model Sequence |
MALDSITEQIAHFVGTFELTTEQARWREFYEEFVAQRRKAELEELEDPTRVNIKAQLELDPGEFGPAPYTFVSAQADTPLPTTVSNLNDDTGQAPSTSFGPDFSLPEDAPGFSSFTQIVINNEIIVQEPEYISDLIGSAVTYTVQKIQLNDNDVIGESEFREIETLTEHAEALQDIAMSLHAVSAPSIHIEDYQSGEAVEQLIEQMQSPINVEIEGATIHQFHGEDATGMIVNGEHVDELPDFLDLIPEHHKEDLVAEDTDDDEVAEDDYAEALPAEWNQSEDPEFVDGHTVVAGGNLAVNEVAVTVGWVDAPNIVVGGQAVNLTVVSQVAVVSDVDEGADGVQSETNVVQSSHITTEANEASWVANNVAEDPGQEPIVAIDWISGDLLVTNFIEQTIDATDIDHISTEITASSTAYTLGDNTMTNVANVVELGSYYDVIIIGGDMVSVDVVTQTIVLLDNDVVHGANPTEAEDNLVMNQVSLTTEGEDTHEELSENLASTVSLQEVDTDALEDALLNDPLFAGTELVRVLKIEGDLLQVNIIDQVTMLQDSDDIYVENPGGQEVSGLGAGNALLNSANVTKVGVDSVVMAQEEAYSDVMLHQASLIDSPEEENAELVNEAIALLMEDVDGPGNSENAPGHNNLTSSEAATIDDGLQSMLA
|
| Domain |
Bacteria
|
| Family |
Roseobacteraceae
|
| Species (Full Name) |
Ruegeria denitrificans
|
| Gene |
RUE5091_02765
|
| PDB structures (whole Protein) |
-
|
A0A0P1ICW0