A0A0Q9SLK3 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (90%)
Global pLDDT	83.58
Species	Phycicoccus sp
UniProt	A0A0Q9SLK3
Structure Prediction Model	AlphaFold v4: A0A0Q9SLK3
PDB structures	-
Model length	323
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.2	251-293	43	1-250, 294-323	250	30

Model Sequence

MAGNSQRRGAIRKGASKKGATVGSGGQRRRGLEGRGPTPKAEDRPKHKANRIAKAVEKHGSKPGARPSASRGGSRRGKASSEIVAGRNSVVEALRADVPVTTMYVAGRIDSDDRVREALKTATAKGIAILETPRGELDRLTDGAVHQGLALQVPPYEYAHPSDFIDPQAPGIPLVVALDGITDPRNLGAIIRSVAAFGGHGVVVPERRSVGMTASAWKTSAGAAARVPVALAANLTRALEEYRKAGFFVLGLDMDGDVQLPDLALATEPIVIVTGSEGKGLSRLVRETCDQIVSIPMSSAVESLNAGIATGVALYEVARRRAI

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (85%)
Global pLDDT	86.4
Species	Phycicoccus sp
UniProt	A0A0Q9SLK3
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	323
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					66.5	251-293	43	1-250, 294-323	250	30

Model Sequence

Comments

Domain	Bacteria
Family	Intrasporangiaceae
Species (Full Name)	Phycicoccus sp. Soil802
Gene	ASG91_07975
PFAM codes	PF00588, PF08032
InterPro codes	IPR001537, IPR004441, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A0Q9SLK3F1

AF4

Model Sequence

ESM1

Model Sequence