A0A0R0K2F0F1

Ubiquitin carboxyl-terminal hydrolase
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (76%)
Global pLDDT
82.78
Species
Soybn
UniProt
Structure Prediction Model
AlphaFold v4:  A0A0R0K2F0
PDB structures
-
Model length
316
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
84.4 17-309 293 1-16, 310-316 16 7
Model Sequence
MATLDERPSAKRWLPLEANPEVMNQFLWGLGLPLDEAECCDVFGLDEELLEMVPKPVLAVLFLYPITAKSEEERLQQENEKKDYSSKVYFMKQTVGNACGTIGLLHALGNITSEVKLVEGSFFDKFFKSTASMDPLQRAVFLENDREMEVAHSVAATAGDTVASDNVDTHFICFACVDGELYELDGRKSGPISHGPSSPSTLLRAPYFWHYSSSPSPAYICLFLSFILPIKCWRVVLNPVTMTFSTRLGYLIMSEVAGFTISFIFTCFFHYLAIFNCVYLNLQQDAAKVIQSMIQKNPGSLNFNVIAISKKSKDGH
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (74%)
Knot fingerprint
K 52 31 31
Global pLDDT
82.78
Species
Soybn
UniProt
Structure Prediction Model
AlphaFold v1:  A0A0R0K2F0
PDB structures
-
Model length
316
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
84.6 15-307 293 1-14, 308-316 14 9 Knot
95.0 14-170 157 1-13, 171-316 13 146 Slipknot
Model Sequence
MATLDERPSAKRWLPLEANPEVMNQFLWGLGLPLDEAECCDVFGLDEELLEMVPKPVLAVLFLYPITAKSEEERLQQENEKKDYSSKVYFMKQTVGNACGTIGLLHALGNITSEVKLVEGSFFDKFFKSTASMDPLQRAVFLENDREMEVAHSVAATAGDTVASDNVDTHFICFACVDGELYELDGRKSGPISHGPSSPSTLLRAPYFWHYSSSPSPAYICLFLSFILPIKCWRVVLNPVTMTFSTRLGYLIMSEVAGFTISFIFTCFFHYLAIFNCVYLNLQQDAAKVIQSMIQKNPGSLNFNVIAISKKSKDGH
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (67%)
Global pLDDT
77.22
Species
Soybn
UniProt
Structure Prediction Model
PDB structures
-
Model length
316
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
84.2 18-309 292 1-17, 310-316 17 7
Model Sequence
MATLDERPSAKRWLPLEANPEVMNQFLWGLGLPLDEAECCDVFGLDEELLEMVPKPVLAVLFLYPITAKSEEERLQQENEKKDYSSKVYFMKQTVGNACGTIGLLHALGNITSEVKLVEGSFFDKFFKSTASMDPLQRAVFLENDREMEVAHSVAATAGDTVASDNVDTHFICFACVDGELYELDGRKSGPISHGPSSPSTLLRAPYFWHYSSSPSPAYICLFLSFILPIKCWRVVLNPVTMTFSTRLGYLIMSEVAGFTISFIFTCFFHYLAIFNCVYLNLQQDAAKVIQSMIQKNPGSLNFNVIAISKKSKDGH
Comments
Domain Eukaryota
Family Fabaceae
Species (Full Name) Glycine max
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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