A0A0R1H1T3 | AlphaKnot 2.0

AF4

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Information

Protein name	Amino acid transporter
Main knot	4₁ (61%)
Global pLDDT	88.37
Species	Loigolactobacillus bifermentans
UniProt	A0A0R1H1T3
Structure Prediction Model	AlphaFold v4: A0A0R1H1T3
PDB structures	-
Model length	280
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.7	26-269	244	1-25, 270-280	25	11

Model Sequence

MKKNVSPLKRTLRTWDLTFLGIGAIIGTGIFVLTGKGALTAGPALSVSFLIAAICCGFAALCYAEFASIAPVAGSAYTYAYVAFGEIIAFIIGWDLILEYALSAATVSAGWSGYFVNLLDNLGIHIPTILTAAAGTTPGVTTVFNLPAFIIVLVITWIISNGITQTKRTNDTMVIIKLAVIVLFIICTVWFIKPQNWHPFNPFGLYSCHNGTATGIIPAASIVFFSFIGFDAVSSSAEETINPSKTLPRGILLSLVISTILYIIMTLIMTGVVPFKLFSK

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid transporter
Main knot	4₁ (60%)
Global pLDDT	91.34
Species	Loigolactobacillus bifermentans
UniProt	A0A0R1H1T3
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	280
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.0	26-269	244	1-25, 270-280	25	11

Model Sequence

Comments

Domain	Bacteria
Family	Lactobacillaceae
Species (Full Name)	Loigolactobacillus bifermentans DSM 20003
Gene	FC07_GL000097
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A0R1H1T3F1

AF4

Model Sequence

ESM1

Model Sequence