| Protein name |
DUF4243 domain-containing protein
|
| Main knot |
61 (39%)
|
| Global pLDDT |
92.72
|
| Species |
Bradyrhizobium valentinum
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
A0A0R3LWU5
|
| PDB structures |
-
|
| Model length |
273
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot |
|---|
Model Sequence |
MAAMAESVPSVLEAEARGEIADIYADIRKVLGTGVVNLIWRNLATMPGALEWTWSTVRPLYLGDAPLHAEAVRRTIALPDWPGFSTDTLLAAGVDETERALIRDVLDSYQYTNALALVVLSALLVHYEPRPADAVAPAATAPKPSGAKIPELPPMDALDPEVAALVGELNSFGEDTEPQLIASMYRHLAYWPAYLALVRTMLAPLQREGRLNALTLSTRALGYAHGAVLASQLKPNTPPDTLKGALASCRLFVEHPIARMTALCALIQRATPE
|
| Protein name |
DUF4243 domain-containing protein
|
| Main knot |
61 (42%)
|
| Global pLDDT |
92.96
|
| Species |
Bradyrhizobium valentinum
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A0R3LWU5
|
| PDB structures |
-
|
| Model length |
273
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
93.7 | 70-264 | 195 | 1-69, 265-273 | 69 | 9 |
Model Sequence |
MAAMAESVPSVLEAEARGEIADIYADIRKVLGTGVVNLIWRNLATMPGALEWTWSTVRPLYLGDAPLHAEAVRRTIALPDWPGFSTDTLLAAGVDETERALIRDVLDSYQYTNALALVVLSALLVHYEPRPADAVAPAATAPKPSGAKIPELPPMDALDPEVAALVGELNSFGEDTEPQLIASMYRHLAYWPAYLALVRTMLAPLQREGRLNALTLSTRALGYAHGAVLASQLKPNTPPDTLKGALASCRLFVEHPIARMTALCALIQRATPE
|
| Protein name |
DUF4243 domain-containing protein
|
| Main knot |
61 (38%)
|
| Global pLDDT |
90.97
|
| Species |
Bradyrhizobium valentinum
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
273
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
93.4 | 70-264 | 195 | 1-69, 265-273 | 69 | 9 |
Model Sequence |
MAAMAESVPSVLEAEARGEIADIYADIRKVLGTGVVNLIWRNLATMPGALEWTWSTVRPLYLGDAPLHAEAVRRTIALPDWPGFSTDTLLAAGVDETERALIRDVLDSYQYTNALALVVLSALLVHYEPRPADAVAPAATAPKPSGAKIPELPPMDALDPEVAALVGELNSFGEDTEPQLIASMYRHLAYWPAYLALVRTMLAPLQREGRLNALTLSTRALGYAHGAVLASQLKPNTPPDTLKGALASCRLFVEHPIARMTALCALIQRATPE
|
| Domain |
Bacteria
|
| Family |
Nitrobacteraceae
|
| Species (Full Name) |
Bradyrhizobium valentinum
|
| Gene |
CP49_36190
|
| InterPro codes |
IPR029032
|
| PDB structures (whole Protein) |
-
|